Gene RPC_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1962 
Symbol 
ID3973635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2133453 
End bp2134151 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID637925073 
ProductABC transporter related 
Protein accessionYP_531838 
Protein GI90423468 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCACCTC TCATTGAAGT CAGCGGGATC GTCTTCGCCT ATCCCGGGCA GTCCAGGGTT 
CTCGACGGCG TCGACCTGTC GCTGTATCCC GGCGAACGAC TCTGTCTGGT CGGCCCCAAC
GGCGCCGGCA AAAGTACGCT GCTGCAAATT CTGGTCGGCC TCTTGGTGCC GAGCGCCGGA
GCGGTGACGG CGTTCGGCCG CGCCCGACGG ACCGAGCGCG ACTTCCACGA AGTCCGCCAG
CGCGCCGGCT TCGTGTTCCA GGACCCCGAC GACCAGCTGT TCTGTCCGAC CGTCGCCGAA
GACGTCGCGT TCGGCCCGCT CAACCTCGGC AAGAGTCGCC AGGAGGTTGC GACGATCGTG
AACGATACGC TCGAACGGCT CGACCTCAAG CATTTGCGCG ATCGCGTCAC CCACAAACTC
TCCGGCGGCG AAAAGCGGCT GGTCACATTG GCTGCCGTAT TGGCGATGCA GCCCGAGGTC
CTGCTGCTCG ACGAGCCGAC CAACGCCCTC GACGAGCGCT TCTACAACCG GTTGATCGAT
ATTCTGACCG GCCTTCCGCA GGCGATGATC GTGGTGTCAC ACGACCCACA CTTTCGACAC
GCCATCGGCT CGCGCAGCGT CGGTCTCAAG GAGGGACGGC TATCGACGCT CGACGAGGCG
TCTCGTGTCG ATTCTCGGAT CTTGCCGCGG CCGGTCTGA
 
Protein sequence
MPPLIEVSGI VFAYPGQSRV LDGVDLSLYP GERLCLVGPN GAGKSTLLQI LVGLLVPSAG 
AVTAFGRARR TERDFHEVRQ RAGFVFQDPD DQLFCPTVAE DVAFGPLNLG KSRQEVATIV
NDTLERLDLK HLRDRVTHKL SGGEKRLVTL AAVLAMQPEV LLLDEPTNAL DERFYNRLID
ILTGLPQAMI VVSHDPHFRH AIGSRSVGLK EGRLSTLDEA SRVDSRILPR PV