Gene RPC_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1960 
Symbol 
ID3973633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2132040 
End bp2132672 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content68% 
IMG OID637925071 
Producthypothetical protein 
Protein accessionYP_531836 
Protein GI90423466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA CTATTGCTTC GTTGCTGCTT GCGCTGGTCG TCGCCGGCGG CGCCTCCGGT 
TCAGCCTTCG CACACAAGGT CGTCGCCGGT GCCTTCGCCA GTGGGGACCG GATCGAAGGT
GAAATCGGCT TTTCCGACGG TTCGATGGCC AAGAACGTGG TGGTCGAGGT GCTCGCCGAA
GACGGCAGCA AACTCGGCGA GGCCCGCACC GGTGAGGACG GCAGCTTCGT CTTCGTGCCG
ACCAAGCGGG TCGTCCACAT CTTCCACGCC GATCTCAGCG GCGGCCACGT CGCCAACATC
CGCCTGGATG TCTCCGATCT GCCCGCCAGC CTTGCTGCGG TCGCGGCTGA TGGGGACGCG
GCGGTGGCCG TGGCTCCGGT GCCGACGGGC GCAACGCCGT CCGCCGCCGC GCCGCCCGCC
GGCGCTCCGG GGCCTTCTGC GATCAGCGAC GCGCAGCGCG CCGCTTTCGC CGAGGCGGTG
CGCAACGAGA TCAAGCCGCT GCGGCGCGAG ATCATCGCGC TGAAGGAGAA GAACGATCTG
CAGTCGATCC TCGGCGGCCT CGGCTACATC GTGGGCCTGT TCGGCCTGTG GCTGTTCTTG
GCCGCGCGAC GTCAGAAGCC GCTGGCCGGT TGA
 
Protein sequence
MNKTIASLLL ALVVAGGASG SAFAHKVVAG AFASGDRIEG EIGFSDGSMA KNVVVEVLAE 
DGSKLGEART GEDGSFVFVP TKRVVHIFHA DLSGGHVANI RLDVSDLPAS LAAVAADGDA
AVAVAPVPTG ATPSAAAPPA GAPGPSAISD AQRAAFAEAV RNEIKPLRRE IIALKEKNDL
QSILGGLGYI VGLFGLWLFL AARRQKPLAG