| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1927 |
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| Symbol | |
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| ID | 3973559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2098162 |
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| End bp | 2100009 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925038 |
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| Product | ABC transporter related |
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| Protein accession | YP_531803 |
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| Protein GI | 90423433 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.682605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCT CGGACAAGCG ATCGATCAGG GAACGGCTCG GCGCGCTGCG GAACCTGAAG
CCGTTTATCG CGATGGTCTG GCGCACCAGC CCATCGCTGA CCCTGACCTC GCTGCTGCTG
CGGCTGTTGC GCGCCGTGCT TCCGGTGGCG ACGCTGTTTG TCGGCAAATT GATTATCGAC
GACGTCGTGC TGCTGGTGCA GCTGCCGGAC AAGCCGTCGA CTTTCGCGCA GTGGCTGGAC
AGCGGCCGGC TGAATTGGCT GGGCCTGTTG CTCGCCGCCG AGTTGGCGCT GGCGATCGTG
GCGGATCTGC TCGGGCGCGT GGTGGCGCTG GTCGACAGCT TGTTGTCGGA GCGCGTGACC
AACGCCTCCA GCGTGCGGCT GATGCAGCAT GCCGCGACGC TGGATCTGGA AGATTTCGAG
GACGCCGATT TCCAGGATCA GCTGGAGCGG GCGCGCCGGC AGACCAGCGG CCGGATGACG
CTGATGGCGC AATTGTTCGG TCAGGCGCAG GACATCGTGA CCGTGGTCAG CTTCGCCGGC
GGGCTGATCT TCTACGCGCC GTGGCTGATC GCGCTGTTGC TGCTGGCGCT GGTGCCGTCG
TTTCTCGGCG AGGCGCACTT CAGCGCCAAG AGCTATTCGC TGGATTTCGT GCGCACGCCG
GAGCGGCGCG GGCTGGACTA TGTCCGGCAG ACCGCCGCCA GCGTCGAGAC CGCCAAGGAA
GTGAAGATCT TCGGGCTCAG CGGCTTTCTG ATCGACCGTT ACGTGCGCCT CGCCACCGAG
TTCTACGCCG CCAACCGCAA TCTGGCGCTG CGCCGCGCCG GCTGGGGAAG CCTGTTCACC
GCGCTCGGCA CCACCGGCTA TTATCTGGCC TATGGCTATA TCGTGTGGCG CACGCTGGCC
GGCGAATTTT CGGTCGGCGA TCTCACCTTT CTGGCGGGCT CGTTCCGCCG GCTCAGCACG
CTGCTCGAAG GGCTGTTGAG CAGTTTTTCG AGCACCGCAA GCCAGGCGCT GTATCTCAAC
GACCTGTTTG CGTTCTTCGA GGTCAAGCCG GAGATCCTGT CGCCGTCCGA TCCGCGGCCG
TTCCCGCAGC CGATCCGCGA GGGCTTCGTG TTCGAGGATG TCGGCTTCAT CTATCCCGGC
GCCGAACGGT GGGCGGTCCG CCATCTCAGC TTCGCGCTGC GCGCCGGCGA GATGCTCGCC
CTGGTCGGCG AGAACGGCGC CGGCAAGACC ACCTTGGTGA AGCTGCTTGC GCGGCTCTAT
GACCCGGACG AAGGCCGGGT GCTGCTCGAT GGCCACGATC TGCGAGACTA TGACCTCGAC
GCGTTGCGCG GCCATATGGG CGTGATCTTT CAGGACTTCT TCCGCTACAA CCTCACCGCC
GCCGACAATA TCGCGGTCGG CAAGATCGAC GCGCGCGACG ATCGTGACCG CATCGAACGG
GCCGCCCGCA GCAGCCAGGC CGACGAGGTG ATTGCGCGAT TGCCGGGCGG CTACGAGCAG
ATGATCGGCA AGCGGTTTCG CAACGGCGTC GAATTGTCCG GCGGAGAATG GCAGAAGATC
GCGATCGCGC GCGCCTATAT GCGCGAGGCA CCGGTACTGA TCCTGGACGA GCCGACCGCG
GCGCTGGACG CGCGATCCGA GTTCGAGGTG TTCCAGCGCT TCAAGGCGCT CAGTGCCGGC
AAGACCGGCA TTCTGATCTC GCACCGCTTT TCCAGCGTAC GGATGGCCGA TCGGATTCTC
GTGCTCGCCG ACGGCAAGGT GGAATCCGCC GGCACGCACG ACGAACTGAT GACGCAGGGC
GGCCGCTATT CCGATCTGTT CGAGCTGCAG GCCGCCGGCT ATCGCTAG
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| Protein sequence | MQTSDKRSIR ERLGALRNLK PFIAMVWRTS PSLTLTSLLL RLLRAVLPVA TLFVGKLIID
DVVLLVQLPD KPSTFAQWLD SGRLNWLGLL LAAELALAIV ADLLGRVVAL VDSLLSERVT
NASSVRLMQH AATLDLEDFE DADFQDQLER ARRQTSGRMT LMAQLFGQAQ DIVTVVSFAG
GLIFYAPWLI ALLLLALVPS FLGEAHFSAK SYSLDFVRTP ERRGLDYVRQ TAASVETAKE
VKIFGLSGFL IDRYVRLATE FYAANRNLAL RRAGWGSLFT ALGTTGYYLA YGYIVWRTLA
GEFSVGDLTF LAGSFRRLST LLEGLLSSFS STASQALYLN DLFAFFEVKP EILSPSDPRP
FPQPIREGFV FEDVGFIYPG AERWAVRHLS FALRAGEMLA LVGENGAGKT TLVKLLARLY
DPDEGRVLLD GHDLRDYDLD ALRGHMGVIF QDFFRYNLTA ADNIAVGKID ARDDRDRIER
AARSSQADEV IARLPGGYEQ MIGKRFRNGV ELSGGEWQKI AIARAYMREA PVLILDEPTA
ALDARSEFEV FQRFKALSAG KTGILISHRF SSVRMADRIL VLADGKVESA GTHDELMTQG
GRYSDLFELQ AAGYR
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