| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1847 |
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| Symbol | |
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| ID | 3971861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2008002 |
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| End bp | 2010329 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924960 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_531725 |
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| Protein GI | 90423355 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0491237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.422245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCG CACAAGCTGC GAGCGCCTGC GCGCAATCCG ATTCGATCAA GGGATTGGCG
CAGTCGATCG CAAAACCGGC CTATCACCGG CTGCTGACCG CGGAGCCCGC GCTCCGCCGT
GCCGTGCCCA CGCTGATCAT CGCCTTCCTG ATCACCATCT GCTTCGGGGC TTCGGTGCAG
ATCATCGATC AGACCCGGCA GAAACGCACC GCGACCAACC GCGATCTCGC GGCGCTGGCC
GATCTGCTCG CCGAGCGGAT CGATCGCGCC GGATCGCCGC GACAACAGGA CCGCGCGGCG
AGCATCGGCC GTCTGCAAGG CCTGCTTCCG GGACTGGTTC CGGCCTGGGG AATTGCCGTT
GGCCGTTACA TCATCGTGGT CGGCGCCGAT CAGAGCATCC TGGCGCGGCT TCCGGTCGAT
GTTCCGGTCG GCGACGCCAC CCGCATCCTC GAAGTGCTGA GCGCGACGCA ACCGCTCACC
GCATCCGCGC CGCAATCCGG CATCACCGAC ATCGCCCTGC CCGACGGCCG CACCGCGATC
GCTACCCAAC GCGTCATCCG CTCGCTGCCG GGCCAGGTGG TCATCATTCA AGAAAATGTC
GAACCGATCT GGCGATCCGA CACCGCGCTG TCGATCACGC TGTCCGCCAC CACCGGCTTC
GTGGTGCTGA TCCTCGGCTT CGCGTTTCAC TGGCAATCGA CGAGGGCGCG CGAGGGCGAC
CTGATCAACG ACGCGGTGCG CGGCCGCATC GACACCGCAC TGAACCGCGG CCGCTGCGGG
CTGTGGGACT GGGATCTGTC GCGCGGGCGG ATTTTCTGGT CGCAATCGAT GTTCACCATG
CTCGGCTTGG AAAGCCGCAG CGATCTGTTG ACCTTCGGCG AAGTCAACGC GCTGGTGAAA
TCCGACGACA TCGACCTGTT CGCGATCGCC AACCAACTGA TCACCGGCAC CATCAGCCAA
ATCGACCACA CCTTTCGCAT GCAGCACGCC AACGGCCATT GGATCTGGCT GCGGGTGCGC
TGCGAACTGA GCCAGGGCGC CGGCGATGCG GGGACGCATC TGATCGGGAT CGCGGTCGAC
ATCACCGAAC ACAAGAGCCT CGCCGAGCGC ACCGTGGAAG CCGATCTGCG GCTGCGCGAC
GCCATCGAGA CCATCCCCGA AGCCTTCGTG CTGTGGGACG CGGAGAACCG GCTGGTGCTG
TGCAATTCGC ACTTCCAGCG CCTGCATAAA CTGCCGGATT CCGCGGTGAC GCCCGGCACC
TCCTACGAGA CGGTGGTCGA GGTCGGCACC ATGCCGGAAG CGCGCACCCG GCTGCCCGAA
GCCGGCCACC ACCCGCCCGG CGCCCGCACC TTCGAGGCGC AACTCGACAA CGGCAAATGG
CTGCATATCA GCGAGCGCCG CACCAAGGAC GGCGGCTACG TCGCGGTCGG CACCGACATC
ACCCGGATCA AGGAGCATGA GCAGAAGCTG GTCGAGAACG ATCTGCGGCT GCGCGCCACG
GTGGTCGACC TGAAGCGATC GCAGGCGACG CTGGAGCGTC AGGCCGTCGA ACTGGTCGAT
CTGGCGCAGA AATACTCCGA AGAAAAGAAC CGCGCCGAAG ACGCCAACCA GACCAAGTCC
AAATTTCTCG CCAATATGAG CCACGAATTG CGCACGCCGC TCAACGCCAT CATCGGCTTT
TCCGAGATCA TGGGCAGCGG CATGTTCGGC TCGCTCGGCT CGGAGAAGTA CCAGGAATAT
TGCCACGACA TCCTGACCAG CGGGCACTAT CTGCTCGAAG TGATCAACGA CATCCTCGAC
ATGTCGAAGA TCGAGGCAGG ACGCATGAAG CTCGATCTCG AACCGTTCGA CCTCGCCACC
ACGCTGTCGG AATCGCTGCG GGTGGTGTCG GGCCGCGCCG ACAACAAGCA ATTGATGCTG
CGCGCCGATA TCGACAACGA CATTCCGGTG CTCGCCGACC GCCGCGCCAT CAAGCAGATC
CTGGTCAACC TGTTGTCCAA CGCGGTGAAG TTCACCCCCG ACGGCGGCCG CGTCACGGTG
CGCGGCCGGG TGTTCGAGGA GCAGATCGTG CTGCTGATTG CCGACACCGG CATCGGCATC
GCGAAGCAAT CGCTGCGCCG GCTCGGCCAG CCGTTCGAAC AGGTCGAAAG CCAGTTGACC
AAGACCTATC ACGGCTCCGG ACTGGGACTC GCGATCGCCA AGTCGCTGAC CAACCTGCAT
GGCGGTTCGA TGCGGCTGCG CTCGCAGCTC GGCGTCGGCA CCGTGGTCCG CGTCGCCCTG
CCGCGCGACG CCGCCAAGGC CGGCGATAAG ATCTCCGCGG CCGCCTGA
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| Protein sequence | MARAQAASAC AQSDSIKGLA QSIAKPAYHR LLTAEPALRR AVPTLIIAFL ITICFGASVQ
IIDQTRQKRT ATNRDLAALA DLLAERIDRA GSPRQQDRAA SIGRLQGLLP GLVPAWGIAV
GRYIIVVGAD QSILARLPVD VPVGDATRIL EVLSATQPLT ASAPQSGITD IALPDGRTAI
ATQRVIRSLP GQVVIIQENV EPIWRSDTAL SITLSATTGF VVLILGFAFH WQSTRAREGD
LINDAVRGRI DTALNRGRCG LWDWDLSRGR IFWSQSMFTM LGLESRSDLL TFGEVNALVK
SDDIDLFAIA NQLITGTISQ IDHTFRMQHA NGHWIWLRVR CELSQGAGDA GTHLIGIAVD
ITEHKSLAER TVEADLRLRD AIETIPEAFV LWDAENRLVL CNSHFQRLHK LPDSAVTPGT
SYETVVEVGT MPEARTRLPE AGHHPPGART FEAQLDNGKW LHISERRTKD GGYVAVGTDI
TRIKEHEQKL VENDLRLRAT VVDLKRSQAT LERQAVELVD LAQKYSEEKN RAEDANQTKS
KFLANMSHEL RTPLNAIIGF SEIMGSGMFG SLGSEKYQEY CHDILTSGHY LLEVINDILD
MSKIEAGRMK LDLEPFDLAT TLSESLRVVS GRADNKQLML RADIDNDIPV LADRRAIKQI
LVNLLSNAVK FTPDGGRVTV RGRVFEEQIV LLIADTGIGI AKQSLRRLGQ PFEQVESQLT
KTYHGSGLGL AIAKSLTNLH GGSMRLRSQL GVGTVVRVAL PRDAAKAGDK ISAAA
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