Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1847 |
Symbol | |
ID | 3971861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2008002 |
End bp | 2010329 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924960 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_531725 |
Protein GI | 90423355 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0491237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.422245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCG CACAAGCTGC GAGCGCCTGC GCGCAATCCG ATTCGATCAA GGGATTGGCG CAGTCGATCG CAAAACCGGC CTATCACCGG CTGCTGACCG CGGAGCCCGC GCTCCGCCGT GCCGTGCCCA CGCTGATCAT CGCCTTCCTG ATCACCATCT GCTTCGGGGC TTCGGTGCAG ATCATCGATC AGACCCGGCA GAAACGCACC GCGACCAACC GCGATCTCGC GGCGCTGGCC GATCTGCTCG CCGAGCGGAT CGATCGCGCC GGATCGCCGC GACAACAGGA CCGCGCGGCG AGCATCGGCC GTCTGCAAGG CCTGCTTCCG GGACTGGTTC CGGCCTGGGG AATTGCCGTT GGCCGTTACA TCATCGTGGT CGGCGCCGAT CAGAGCATCC TGGCGCGGCT TCCGGTCGAT GTTCCGGTCG GCGACGCCAC CCGCATCCTC GAAGTGCTGA GCGCGACGCA ACCGCTCACC GCATCCGCGC CGCAATCCGG CATCACCGAC ATCGCCCTGC CCGACGGCCG CACCGCGATC GCTACCCAAC GCGTCATCCG CTCGCTGCCG GGCCAGGTGG TCATCATTCA AGAAAATGTC GAACCGATCT GGCGATCCGA CACCGCGCTG TCGATCACGC TGTCCGCCAC CACCGGCTTC GTGGTGCTGA TCCTCGGCTT CGCGTTTCAC TGGCAATCGA CGAGGGCGCG CGAGGGCGAC CTGATCAACG ACGCGGTGCG CGGCCGCATC GACACCGCAC TGAACCGCGG CCGCTGCGGG CTGTGGGACT GGGATCTGTC GCGCGGGCGG ATTTTCTGGT CGCAATCGAT GTTCACCATG CTCGGCTTGG AAAGCCGCAG CGATCTGTTG ACCTTCGGCG AAGTCAACGC GCTGGTGAAA TCCGACGACA TCGACCTGTT CGCGATCGCC AACCAACTGA TCACCGGCAC CATCAGCCAA ATCGACCACA CCTTTCGCAT GCAGCACGCC AACGGCCATT GGATCTGGCT GCGGGTGCGC TGCGAACTGA GCCAGGGCGC CGGCGATGCG GGGACGCATC TGATCGGGAT CGCGGTCGAC ATCACCGAAC ACAAGAGCCT CGCCGAGCGC ACCGTGGAAG CCGATCTGCG GCTGCGCGAC GCCATCGAGA CCATCCCCGA AGCCTTCGTG CTGTGGGACG CGGAGAACCG GCTGGTGCTG TGCAATTCGC ACTTCCAGCG CCTGCATAAA CTGCCGGATT CCGCGGTGAC GCCCGGCACC TCCTACGAGA CGGTGGTCGA GGTCGGCACC ATGCCGGAAG CGCGCACCCG GCTGCCCGAA GCCGGCCACC ACCCGCCCGG CGCCCGCACC TTCGAGGCGC AACTCGACAA CGGCAAATGG CTGCATATCA GCGAGCGCCG CACCAAGGAC GGCGGCTACG TCGCGGTCGG CACCGACATC ACCCGGATCA AGGAGCATGA GCAGAAGCTG GTCGAGAACG ATCTGCGGCT GCGCGCCACG GTGGTCGACC TGAAGCGATC GCAGGCGACG CTGGAGCGTC AGGCCGTCGA ACTGGTCGAT CTGGCGCAGA AATACTCCGA AGAAAAGAAC CGCGCCGAAG ACGCCAACCA GACCAAGTCC AAATTTCTCG CCAATATGAG CCACGAATTG CGCACGCCGC TCAACGCCAT CATCGGCTTT TCCGAGATCA TGGGCAGCGG CATGTTCGGC TCGCTCGGCT CGGAGAAGTA CCAGGAATAT TGCCACGACA TCCTGACCAG CGGGCACTAT CTGCTCGAAG TGATCAACGA CATCCTCGAC ATGTCGAAGA TCGAGGCAGG ACGCATGAAG CTCGATCTCG AACCGTTCGA CCTCGCCACC ACGCTGTCGG AATCGCTGCG GGTGGTGTCG GGCCGCGCCG ACAACAAGCA ATTGATGCTG CGCGCCGATA TCGACAACGA CATTCCGGTG CTCGCCGACC GCCGCGCCAT CAAGCAGATC CTGGTCAACC TGTTGTCCAA CGCGGTGAAG TTCACCCCCG ACGGCGGCCG CGTCACGGTG CGCGGCCGGG TGTTCGAGGA GCAGATCGTG CTGCTGATTG CCGACACCGG CATCGGCATC GCGAAGCAAT CGCTGCGCCG GCTCGGCCAG CCGTTCGAAC AGGTCGAAAG CCAGTTGACC AAGACCTATC ACGGCTCCGG ACTGGGACTC GCGATCGCCA AGTCGCTGAC CAACCTGCAT GGCGGTTCGA TGCGGCTGCG CTCGCAGCTC GGCGTCGGCA CCGTGGTCCG CGTCGCCCTG CCGCGCGACG CCGCCAAGGC CGGCGATAAG ATCTCCGCGG CCGCCTGA
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Protein sequence | MARAQAASAC AQSDSIKGLA QSIAKPAYHR LLTAEPALRR AVPTLIIAFL ITICFGASVQ IIDQTRQKRT ATNRDLAALA DLLAERIDRA GSPRQQDRAA SIGRLQGLLP GLVPAWGIAV GRYIIVVGAD QSILARLPVD VPVGDATRIL EVLSATQPLT ASAPQSGITD IALPDGRTAI ATQRVIRSLP GQVVIIQENV EPIWRSDTAL SITLSATTGF VVLILGFAFH WQSTRAREGD LINDAVRGRI DTALNRGRCG LWDWDLSRGR IFWSQSMFTM LGLESRSDLL TFGEVNALVK SDDIDLFAIA NQLITGTISQ IDHTFRMQHA NGHWIWLRVR CELSQGAGDA GTHLIGIAVD ITEHKSLAER TVEADLRLRD AIETIPEAFV LWDAENRLVL CNSHFQRLHK LPDSAVTPGT SYETVVEVGT MPEARTRLPE AGHHPPGART FEAQLDNGKW LHISERRTKD GGYVAVGTDI TRIKEHEQKL VENDLRLRAT VVDLKRSQAT LERQAVELVD LAQKYSEEKN RAEDANQTKS KFLANMSHEL RTPLNAIIGF SEIMGSGMFG SLGSEKYQEY CHDILTSGHY LLEVINDILD MSKIEAGRMK LDLEPFDLAT TLSESLRVVS GRADNKQLML RADIDNDIPV LADRRAIKQI LVNLLSNAVK FTPDGGRVTV RGRVFEEQIV LLIADTGIGI AKQSLRRLGQ PFEQVESQLT KTYHGSGLGL AIAKSLTNLH GGSMRLRSQL GVGTVVRVAL PRDAAKAGDK ISAAA
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