| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1816 |
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| Symbol | |
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| ID | 3971811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1968650 |
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| End bp | 1969057 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924929 |
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| Product | Phage major tail protein, TP901-1 |
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| Protein accession | YP_531694 |
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| Protein GI | 90423324 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5437] Predicted secreted protein |
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| TIGRFAM ID | [TIGR02126] phage major tail protein, TP901-1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0067398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.215518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGCGC AAAAGGGCAA GGACCTGTTG TTGAAGATTC ACGACGGCAC GGGCTTCGTG
TCAGTGGCCG GCCTGCGCAG CCGCAAGATC GCCTTCAACG CCGAATTGGT CGATATCACC
CACGCCGAAT CCGCCGATCG CTGGCGCGAA TTGCTGGCCG GCGCCGGCGT TCGCCGCGCC
GCGATCTCCG GGCGCGGACT GTTCAAGGAC ACAGCCTCCG ACGCCTTGGT GCGGCAGGCG
TTCTTCGACG GTGCCGTCAA GCCGTGCCAA CTGGTGGTGC CGGATTTCGG CATCATCGAA
GGCGCGTTCC AGATCGCCAG CCTGGAATTC GCCGGCGAGC ACAACGGCGA AGTGACGTTC
GACCTTGCGC TCGAAAGCGC CGGCGCGCTG ACCTTTGTCG CGGCGTGA
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| Protein sequence | MGAQKGKDLL LKIHDGTGFV SVAGLRSRKI AFNAELVDIT HAESADRWRE LLAGAGVRRA
AISGRGLFKD TASDALVRQA FFDGAVKPCQ LVVPDFGIIE GAFQIASLEF AGEHNGEVTF
DLALESAGAL TFVAA
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