| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1814 |
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| Symbol | |
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| ID | 3971809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1967876 |
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| End bp | 1968196 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637924927 |
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| Product | hypothetical protein |
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| Protein accession | YP_531692 |
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| Protein GI | 90423322 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5614] Bacteriophage head-tail adaptor |
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| TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00514089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.210861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGATC CGGGACGCCT GAAGACGCGG CTGACCATCC TCGCCCCGGT GGAGACGCCG
GACGGGCAGG GCGGCGTGGC GCGTGATTAT GCGACGCAGG CCACCGTGTG GGCGGCGGTG
ACGCCGCTGT CGGCGCGCGG CGAGGTCGCA GCCGACGCCG CCGGCGCCGT GGTCCGCGTC
CGCATCACGC TGCGCAGCAA TGTCGAGCTC GGCTTGCAGC ATCGGCTGCG CGACCGCGGC
CGCGACTATC GCGTCGTCTC GATCCGCGCG ATCGAGGACG GCCGCTTCAA CGAAATCGAC
GCGGAACAGC GCGTCGAGTG A
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| Protein sequence | MIDPGRLKTR LTILAPVETP DGQGGVARDY ATQATVWAAV TPLSARGEVA ADAAGAVVRV
RITLRSNVEL GLQHRLRDRG RDYRVVSIRA IEDGRFNEID AEQRVE
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