Gene RPC_1774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1774 
Symbol 
ID3972213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1929181 
End bp1929597 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID637924887 
ProductMucR family transcriptional regulator 
Protein accessionYP_531652 
Protein GI90423282 
COG category[K] Transcription 
COG ID[COG4957] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.257701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0107118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA GCACGGGTAA GAGCTTCATC GATCTCACGG CAACCATCGT GTCCGCCTAT 
GTGAGCAACA ACCCGACACC GGCGGCGGAT TTGCCGGGTT TGATCGGCCA GATTCACGCC
GCCCTGGTCC GGGTTTCGGC CGGCCGCGTC GAGCCGCCGC CGGAGCCGGC GAAACCTGCG
GTGTCGCTGA AGAAATCGAT GACCGCGGAT TATCTGGTCT GTCTGGAGGA CGGCAAGCGC
TTCAAATCGC TGAAGCGGCA TCTGCGCACC CAATACAACA TGACGCCGGA GCAATACCGC
GACAAATGGG GCCTGGCGCC GGATTATCCG ATGGTGGCGC CGAACTATGC CGTGGCGCGC
TCGCAGCTCG CCAAGAAGAT GGGGCTCGGC CAGCAGCGCC GCCGCCGCGG CAAATAG
 
Protein sequence
MTDSTGKSFI DLTATIVSAY VSNNPTPAAD LPGLIGQIHA ALVRVSAGRV EPPPEPAKPA 
VSLKKSMTAD YLVCLEDGKR FKSLKRHLRT QYNMTPEQYR DKWGLAPDYP MVAPNYAVAR
SQLAKKMGLG QQRRRRGK