Gene RPC_1773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1773 
Symbol 
ID3972212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1927933 
End bp1928937 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID637924886 
Producthypothetical protein 
Protein accessionYP_531651 
Protein GI90423281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00548408 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTTTGC TGTTGACGGC CGGAATTGGC CTGCTCCTCG TCGGCCTCGC GGCGATCGCG 
TTCGGTATCC CAGTCAAGGA ATTCAGCTTC GGCAACACGA TGATCCTGTG CGGCACCATC
GTGGCGTCCA CCGGCGCGCT CATGCTCGGA ATGCGTGCGG CGGTAAATGC GCTGCGCGCA
GCCGTATCGG GCGCCCCCGC CGCCACCGCC GCTGCGCCGC ATTCCAACAA CGCGGCTCAC
GCGGCGCGAC GGCTGCCGCC GCTGGAGGCT CCGGCGCCGG ACCATACGCC GGGCGACGGC
GAGACTTTCC TGTTCAGCCG CGACCGGCCG GCGCATGAGC GCCCGGACAG CTCCGGCGCG
ACGGAGGCGA GTTCCGCGCG CGGCAGCGAG CGTTCGGCGG CGGAGAAATT CGCGGCTCCC
GCCGAGTCCT CGCCGCCGCC GCCGTGGCGG GACGAGATCG CAGGGGATCG CGGCCGGACG
CGCAGCCCGC CGCCGACCCG ATCCGCTGAC CCCGAACCCG AGCCCGAGCC CGAGCCCGAG
GCTGAAACCG AACCGGCGCC GCCGAGCGAT TCGACGCAAA AGCAGCGCCG CAACCTGCTG
TTCGCCTCCA GCCGCCGCGA GCGCGAACGC GCGGCGCGCG CCGAACAGGC GGCCGAGGCG
GGAGGCTCCG CGCTGCCGGA GCTGCCGCTG TTGGCGAACG AGCCGCGCCG CGCCACGTTC
GAAGAAGCCT GGCCGGAAAC CGAGCGCGCC CGCCCCGAGC CGCTCCGCGC CCGGCTGTTC
CCGGGCGCCG AGGCGCACGA TCCGACCGCG GCCAGCGAGC CGGCCGCGCC CGTGTCCGAT
GAGCCGGATG AGGCGCCGCA GGTCACCGTG CTGAAGTCCG GCGTGGTTGA TGGGATGGGC
TATTCGTTAT ATTCAGACGG ATCGATCGAA GCCGAGATGC CGGAGGGCAA GATGCGCTTC
GCCTCGATCG ACGAGCTGCG GTCGCATCTC GACCAACGCA GTTGA
 
Protein sequence
MILLLTAGIG LLLVGLAAIA FGIPVKEFSF GNTMILCGTI VASTGALMLG MRAAVNALRA 
AVSGAPAATA AAPHSNNAAH AARRLPPLEA PAPDHTPGDG ETFLFSRDRP AHERPDSSGA
TEASSARGSE RSAAEKFAAP AESSPPPPWR DEIAGDRGRT RSPPPTRSAD PEPEPEPEPE
AETEPAPPSD STQKQRRNLL FASSRRERER AARAEQAAEA GGSALPELPL LANEPRRATF
EEAWPETERA RPEPLRARLF PGAEAHDPTA ASEPAAPVSD EPDEAPQVTV LKSGVVDGMG
YSLYSDGSIE AEMPEGKMRF ASIDELRSHL DQRS