Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1773 |
Symbol | |
ID | 3972212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1927933 |
End bp | 1928937 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637924886 |
Product | hypothetical protein |
Protein accession | YP_531651 |
Protein GI | 90423281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00548408 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTTTGC TGTTGACGGC CGGAATTGGC CTGCTCCTCG TCGGCCTCGC GGCGATCGCG TTCGGTATCC CAGTCAAGGA ATTCAGCTTC GGCAACACGA TGATCCTGTG CGGCACCATC GTGGCGTCCA CCGGCGCGCT CATGCTCGGA ATGCGTGCGG CGGTAAATGC GCTGCGCGCA GCCGTATCGG GCGCCCCCGC CGCCACCGCC GCTGCGCCGC ATTCCAACAA CGCGGCTCAC GCGGCGCGAC GGCTGCCGCC GCTGGAGGCT CCGGCGCCGG ACCATACGCC GGGCGACGGC GAGACTTTCC TGTTCAGCCG CGACCGGCCG GCGCATGAGC GCCCGGACAG CTCCGGCGCG ACGGAGGCGA GTTCCGCGCG CGGCAGCGAG CGTTCGGCGG CGGAGAAATT CGCGGCTCCC GCCGAGTCCT CGCCGCCGCC GCCGTGGCGG GACGAGATCG CAGGGGATCG CGGCCGGACG CGCAGCCCGC CGCCGACCCG ATCCGCTGAC CCCGAACCCG AGCCCGAGCC CGAGCCCGAG GCTGAAACCG AACCGGCGCC GCCGAGCGAT TCGACGCAAA AGCAGCGCCG CAACCTGCTG TTCGCCTCCA GCCGCCGCGA GCGCGAACGC GCGGCGCGCG CCGAACAGGC GGCCGAGGCG GGAGGCTCCG CGCTGCCGGA GCTGCCGCTG TTGGCGAACG AGCCGCGCCG CGCCACGTTC GAAGAAGCCT GGCCGGAAAC CGAGCGCGCC CGCCCCGAGC CGCTCCGCGC CCGGCTGTTC CCGGGCGCCG AGGCGCACGA TCCGACCGCG GCCAGCGAGC CGGCCGCGCC CGTGTCCGAT GAGCCGGATG AGGCGCCGCA GGTCACCGTG CTGAAGTCCG GCGTGGTTGA TGGGATGGGC TATTCGTTAT ATTCAGACGG ATCGATCGAA GCCGAGATGC CGGAGGGCAA GATGCGCTTC GCCTCGATCG ACGAGCTGCG GTCGCATCTC GACCAACGCA GTTGA
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Protein sequence | MILLLTAGIG LLLVGLAAIA FGIPVKEFSF GNTMILCGTI VASTGALMLG MRAAVNALRA AVSGAPAATA AAPHSNNAAH AARRLPPLEA PAPDHTPGDG ETFLFSRDRP AHERPDSSGA TEASSARGSE RSAAEKFAAP AESSPPPPWR DEIAGDRGRT RSPPPTRSAD PEPEPEPEPE AETEPAPPSD STQKQRRNLL FASSRRERER AARAEQAAEA GGSALPELPL LANEPRRATF EEAWPETERA RPEPLRARLF PGAEAHDPTA ASEPAAPVSD EPDEAPQVTV LKSGVVDGMG YSLYSDGSIE AEMPEGKMRF ASIDELRSHL DQRS
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