| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1725 |
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| Symbol | |
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| ID | 3972378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1871640 |
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| End bp | 1872791 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924838 |
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| Product | radical SAM family protein |
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| Protein accession | YP_531603 |
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| Protein GI | 90423233 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0670141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTC CGTTTTTCAA AGAGCTGCGG ATCGGCGGCT ATCTCATCAA GCAGAAGATG
CTCGGCCGCA AACGCTACCC GCTGGTGCTG ATGCTCGAAC CCCTGTTCCG TTGCAATCTG
GCCTGCGTCG GCTGCGGCAA GATCGACTAC CCCGACGCCA TCCTCAATCG CCGCATGACC
GCGCAGGAAT GCTGGGATGC CGCCGAGGAA TGCGGCGCCC CGATGGTGGC GATTCCGGGC
GGCGAGCCGC TGATCCACAA GGAGATCGGC GAAATCGTCC GCGGCCTGGT GGAGCGTAAG
AAATTCGTCT CGCTGTGCAC CAACGCGCTG CTGCTCGAGA AGAAGCTGCA TCTGTTCGAG
CCGTCGCCCT ATCTGTTCTT CTCGGTGCAT CTCGACGGCA TGAAAGAGCA CCATGACAAG
GCGGTGTCGC AGGAGGGCGT GTTCGACCGC GCGGTGTCGG CGATCAAGGC GGCGAAGGCC
AAGGGCTTTA CCGTCAACGT CAACGCCACG GTGTTCGACG GCCATTCCGC CGCCGACATC
GCCAAGTTCA TGGACTTCAC CACCGAACTC GGTGTCGGGG TGTCGATGTC GCCGGGCTAT
GCCTATGAGC GGGCGCCCGA TCAGGAACAC TTCCTCAACC GCACCAAGAC CAAGAAGCTG
TTCCGCGACG TCTTTGCGCT CGGCAAGGGC AAGAAGTGGA ACTTCATGCA TTCCGGGCTG
TTCCTGGATT TCCTCGCCGG CAATCAGGAA TACGAGTGCA CGCCCTGGGG CATGCCGGCG
CGCAATATCT TCGGCTGGCA GAAGCCCTGC TACCTGCTCG GCGAGGGCTA CACCGCGACC
TTCAAGGAAT TGATGGAGAC CACCGACTGG GACAGCTACG GCACCGGCAA GTATGAAAAG
TGCGCCGACT GCATGGCGCA TTGCGGCTAC GAGCCGACCG CGGCGAATGC CTCGCTGGTC
AATCCGTTGA AGGCGCTGTG GGTGTCGATC CGCGGCATCC GCACCGCGGG ACCGATGGCG
CCGGAGATCG ATCTGTCGAA GCAGCGGCCA GCGCAGTACA TCTACTCGTC AGAGGTGCAG
AAGCGGCTGT CGGAGATCCG CCGTGACGAG GCTGCCGAAG TGAAGCAGTC ACAGGCCTCG
AGCGCGGCCT GA
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| Protein sequence | MAIPFFKELR IGGYLIKQKM LGRKRYPLVL MLEPLFRCNL ACVGCGKIDY PDAILNRRMT
AQECWDAAEE CGAPMVAIPG GEPLIHKEIG EIVRGLVERK KFVSLCTNAL LLEKKLHLFE
PSPYLFFSVH LDGMKEHHDK AVSQEGVFDR AVSAIKAAKA KGFTVNVNAT VFDGHSAADI
AKFMDFTTEL GVGVSMSPGY AYERAPDQEH FLNRTKTKKL FRDVFALGKG KKWNFMHSGL
FLDFLAGNQE YECTPWGMPA RNIFGWQKPC YLLGEGYTAT FKELMETTDW DSYGTGKYEK
CADCMAHCGY EPTAANASLV NPLKALWVSI RGIRTAGPMA PEIDLSKQRP AQYIYSSEVQ
KRLSEIRRDE AAEVKQSQAS SAA
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