Gene RPC_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1666 
Symbol 
ID3972589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1798766 
End bp1799581 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID637924781 
Producthypothetical protein 
Protein accessionYP_531546 
Protein GI90423176 
COG category[S] Function unknown 
COG ID[COG4336] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTT TGACGGCACC GGGGTTTTCC GGTGCAGCCC CAACGTTGCC ATCGGTTGCC 
GCGCGGCTCG CCTGCCGGGC GGGAAATGCC GAGCAGACCG CGGGACTTGC CCCGGGTTAC
GTGCAGGGCA ATCTGGCTAT CTTACCGGAA AACTTGGCAG CGTCGTTCCA CCGATTTTGT
CAGCAGAACC CAAAACCGTG TCCGATTATC GGCATGTCCG AGGTCGGCGA CCCGAAAATT
CCCTCGCTCG GCCTCGACCT CGATATCCGC ACCGACCTGC CGCGCTACCG GGTGTGGCGC
GACGGCGAAA TGGTCGATGA GCCGACCGAT ATCATGGCAC ACTGGCGTGA AGATCTGGTT
GCCTTCGTGA TTGGCTGCTC GTTTTCGTTC GAGGAAGCCT TGATGGCCGA CGAGTTGCCG
ATCCGCCATA TCGAACAGGG CGTTCGCGTG CCGATGTACC GCACCAACAT CGCTTGCGCG
CCGGCGGGCC CATTCGCCGG TCCGATGGTG GTGTCGATGC GGCCGCTGAA GCCCAAGGAC
GCGATCCGCG CGGTGCAGAT CACCTCGCGG TTTCCCTCGG TGCATGGCGC CCCGGTGCAT
CTCGGCCTGC CGCAATCGAT CGGCATCAAA GACATCGCCA AACCGGATTA CGGTGACCCG
GTGCAGATCA AAGACGACGA AATTCCGGTA TTCTGGGCCT GCGGGGTCAC CCCGCAAGCG
GTGATCGCTG CGGCACGGGT GCCGTTCGCG ATCACCCATT CGCCCGGATT GATGCTTGTC
ACCGACCTCA AGAACAAGCA GCTTGCCGTT CTTTGA
 
Protein sequence
MTVLTAPGFS GAAPTLPSVA ARLACRAGNA EQTAGLAPGY VQGNLAILPE NLAASFHRFC 
QQNPKPCPII GMSEVGDPKI PSLGLDLDIR TDLPRYRVWR DGEMVDEPTD IMAHWREDLV
AFVIGCSFSF EEALMADELP IRHIEQGVRV PMYRTNIACA PAGPFAGPMV VSMRPLKPKD
AIRAVQITSR FPSVHGAPVH LGLPQSIGIK DIAKPDYGDP VQIKDDEIPV FWACGVTPQA
VIAAARVPFA ITHSPGLMLV TDLKNKQLAV L