Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1634 |
Symbol | |
ID | 3972868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1767906 |
End bp | 1769108 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924750 |
Product | VWA containing CoxE-like |
Protein accession | YP_531515 |
Protein GI | 90423145 |
COG category | [R] General function prediction only |
COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.261118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.727818 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA TCGATCACCT CAATCCGCCC ACCGGCAAGA TGGCCGACAA CATCGTCGGC TTCGCCCGCG CGCTACGCGC CGCCGGGCTG CCGGTCGGGC CGGGCGCGGT GATCGACGCC TTGAACGCGC TGCAGCTGAT CGAGGTCGGC CATCGCGGTG ATTTCTACGC CACGCTGCAG GCGATCTTCG TCAAGCGCCA TGAGCATTCA TTAGTGTTCG CGCAGGCCTT CGCGCTGTTC TTCCGTGCCG CCGAGGATTG GAAGCACATG CTGGATTCCA TCCCGCTGCC GGACCACGCC AAGAAAAAGC CGAAGCCGGC GGCGCGCCGG GTGCAAGACG CGCTGGCGCA GCCGACCAGC CACGAGGTGC CGCAAGCGCA GGAGCAGGAA TTGCGGTTAT CGGTGTCCGA CAAGGAAATC CTGCAGAAGA AAGACTTCGC GCAGATGAGC GCCGCGGAGA TCGCGCAGGT GACCCGGGCG ATCGCGCAGA TGAAATTGCC GCAGGCCGAA TTGCGCACGC GGCGTCACGC GCCGGATCCG CATGGCTTGC GGCTCGATTT GCGCCGAACG CTGCGCGGCA GCTTGCGCAC CGGCGGCGAT ATCGTCGACA TCCGCAAGCT CGGCCGCATC GACAAGCCGT CGCCGATCGT GGCGCTGCTC GATATCTCCG GCTCGATGAG CGAATATACG CGTCTATTCC TGCATTTCCT GCACGCCATC ACCGACGCCC GCAAGCGCGT CTCGGTGTTC CTGTTCGGCA CCAGGCTCAC CAACGTTACC CGCGCGCTGC GCGAGCGCGA TCCCGACGAG GCGCTGGCGA ATTGTTCGTC GGCGGTGGAA GATTGGGCCG GCGGCACGCG GATTTCGGCG TCGCTGCACG TCTTCAACAA GCAATGGGCC CGCCGCGTGC TGGGGCAGGG CGCCATCGTG TTGCTGATTT CCGATGGGCT GGAGCGTGAG GCCGATGCCA AGCTGTCGTT CGAGATGGAT CGGCTGCATC GCTCCTGCCG GCGGCTGATC TGGCTCAACC CGCTGCTGCG GTTCGGCGGC TTCGAGGCCA AGGCGCAGGG CATCAAAATG ATGCTGCCGC ACGTTGACGA ATTCCGCCCG GTGCATAATC TGACCTCGAT GCAGGCGCTG ATCGCCGCGC TGTCGGCGCC GCCGCCGGTG CATCACCGCG CGCTGATCCG GTCCGCGGCC TGA
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Protein sequence | MTDIDHLNPP TGKMADNIVG FARALRAAGL PVGPGAVIDA LNALQLIEVG HRGDFYATLQ AIFVKRHEHS LVFAQAFALF FRAAEDWKHM LDSIPLPDHA KKKPKPAARR VQDALAQPTS HEVPQAQEQE LRLSVSDKEI LQKKDFAQMS AAEIAQVTRA IAQMKLPQAE LRTRRHAPDP HGLRLDLRRT LRGSLRTGGD IVDIRKLGRI DKPSPIVALL DISGSMSEYT RLFLHFLHAI TDARKRVSVF LFGTRLTNVT RALRERDPDE ALANCSSAVE DWAGGTRISA SLHVFNKQWA RRVLGQGAIV LLISDGLERE ADAKLSFEMD RLHRSCRRLI WLNPLLRFGG FEAKAQGIKM MLPHVDEFRP VHNLTSMQAL IAALSAPPPV HHRALIRSAA
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