| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1622 |
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| Symbol | |
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| ID | 3972837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1757253 |
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| End bp | 1758167 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924738 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_531503 |
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| Protein GI | 90423133 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.332368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.937087 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTATT TCGCCCAACA ACTGATCAAC GGTATCGTGC TCGGCTCGAT CTATGGCCTG
ATCGCCATCG GTTACACGAT GGTTTACGGC ATCGTCGGCA TGATCAACTT TGCCCATGGC
GACATCTTCA TGATCGGCGG CTTCATCGCG CTGATCTCGT TTTTGATCCT GGTCTCGCTC
GGCCTCACCT TCGTGCCGGT GATCCTGCTG ATCGTGCTGC TGGTGTCGAT GGCGATCACG
GCCCTGTATG GTTGGACCGT GGAGCGGATC GCCTACCGGC CGCTGCGGCA TTCGTTCCGC
CTTGCCCCGA TGCTGTCGGC GATCGGCATG TCGTTCGTGT TGATGAATTA TTCCCAGGTG
GCGCAGGGCG CCCGGGTCAA GCCGGTGCCG CCGATCATCA CCGGCGGCTA CACGCTGTAT
GAAGCCGACG GCTTCGTGGT GCGGCTGTCG AACATCCAGA TCATCGTGGT GATCACCACG
GTGGTGCTGC TGGCGATCTT CACCTGGCTG GTGGCCAAAA CCCGGCTCGG CCGCGACATG
CGCGCCTGCG AGCAGGATCA GACTATGGCG GCGTTGCTCG GCGTCGACGT CGACCGCACC
ATCTCGATGA CTTTCGTGAT CGGCGCGGCG CTGGCCGCGG TCGCCGGCAT GATGTACCTG
TTGTATTATG GTCTGGTCGA CTTCTTCATG GGCTTCGTCG CCGGCATCAA GGCGTTCACC
GCGGCGGTGT TGGGCGGCAT CGGCTCGTTG CCCGGCGCCA TGCTCGGCGG CCTCTTGATC
GGGCTGATCG AGACGCTGTG GTCGGCCTAT TTCTCGGTCG AATACAAGGA CGTCGCGGCG
TTCTCGATTC TGATCATCGT CTTGATCTTC CTTCCGACCG GCCTATTGGG CCGTCCGGAA
GTTGAAAAAG TTTGA
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| Protein sequence | MDYFAQQLIN GIVLGSIYGL IAIGYTMVYG IVGMINFAHG DIFMIGGFIA LISFLILVSL
GLTFVPVILL IVLLVSMAIT ALYGWTVERI AYRPLRHSFR LAPMLSAIGM SFVLMNYSQV
AQGARVKPVP PIITGGYTLY EADGFVVRLS NIQIIVVITT VVLLAIFTWL VAKTRLGRDM
RACEQDQTMA ALLGVDVDRT ISMTFVIGAA LAAVAGMMYL LYYGLVDFFM GFVAGIKAFT
AAVLGGIGSL PGAMLGGLLI GLIETLWSAY FSVEYKDVAA FSILIIVLIF LPTGLLGRPE
VEKV
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