Gene RPC_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1617 
Symbol 
ID3972832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1751809 
End bp1752543 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content66% 
IMG OID637924733 
Productcytochrome c biogenesis protein, transmembrane region 
Protein accessionYP_531498 
Protein GI90423128 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.217228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCATG ATGTCTCGAT CCCGGCCGCG CTGATCGCCG GCCTCGTCAG CTTTTTGTCG 
CCCTGCGTAT TGCCGCTGGT GCCGCCATAC CTGATCTATC TGACCGGCGC GACCATCGAA
CACGTCGCCA CCGGCGAGCG CGATGCCGCC TCGAAGCGCG CGGTGATGAT CTCGGCTCTG
ATGTTCGTGC TGGGGTTTTC CACGGTGTTC GTGGCGCTCG GCGCCAGCGC CAGCCTGGTC
GGCAGCCTGA TCCGGGCCTG GTCGGCGCAG CTGTCGATCA TCGCCGGCAT CATCATCATC
CTGATGGGGC TGCATTTCCT AGGGCTGACC CGGATCGGCC TGTTGATGCG CGAAGGCCGG
ATGCCGATCC CCAAACCGGT CGGGCTGTGG GGCGCCTATG TGATGGGGCT GGCCTTCGCG
TTCGGCTGGA CGCCGTGCAT CGGGCCGATC CTCGCCGCGA TCCTCTCGGT CGCCGCCGCC
GAAGCCACCG TCGCCAAGGG CGCCGGACTG CTCGCGGTGT ATTCCGCCGG CCTCGGCATT
CCGTTCCTGC TGGCGGCTTT GATGGTGGAA CAGTTCTCCG CGGTGTTCGC GCGGATGAAG
CGCCACCTCG CCAATGTCGA GCGCGCGATG GGCGTGCTGA TGGTGCTGAC CGGGATCGGC
TTTCTCACCG GCGCGGTGAG CAGTGCGTCG ATCTGGCTGA TGGAGACGTT TCCGGGGCTG
GCGAATTTCG GCTAG
 
Protein sequence
MIHDVSIPAA LIAGLVSFLS PCVLPLVPPY LIYLTGATIE HVATGERDAA SKRAVMISAL 
MFVLGFSTVF VALGASASLV GSLIRAWSAQ LSIIAGIIII LMGLHFLGLT RIGLLMREGR
MPIPKPVGLW GAYVMGLAFA FGWTPCIGPI LAAILSVAAA EATVAKGAGL LAVYSAGLGI
PFLLAALMVE QFSAVFARMK RHLANVERAM GVLMVLTGIG FLTGAVSSAS IWLMETFPGL
ANFG