Gene RPC_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1561 
Symbol 
ID3973117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1692837 
End bp1693265 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID637924677 
Producthypothetical protein 
Protein accessionYP_531442 
Protein GI90423072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00833547 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCACCC CCGCGCAGAT CGCCCTCGTC CACCTCGCCA AGAAGCATCT CGGCTGGAAC 
GAGGAAATGT ACCGCGCCGT CCTGTACAAG CTGGGCGGCG TGGAAAGCGC CAAGGATCTG
GACCAGGGCG GTTTCGCCCT GGTCATGGAG TATGCCACCT CTTTCGGTTT CCGCTCCGAT
TGGACGAAGC GGACCTACGG GAAGCGGCCG GGAATGGCGA CGCCTAAGCA GGTTGATTTG
ATCCGCGACC TGTGGCGGGA ATGGTCCGGG GCGGATGACG ACGCCGCCTT GAACAAGTGG
CTGGACCGGC ATTACAAGGT GGCGGCGCTG CGCTTCGCAA CGTCGGAGGT CGCCTCAAAG
GCGATCACCG GCCTGCGCAG CATGATCCAG CGCAGGAAGA GAGGAAAGAC GGCAGCCGGG
GGGCCGTGA
 
Protein sequence
MITPAQIALV HLAKKHLGWN EEMYRAVLYK LGGVESAKDL DQGGFALVME YATSFGFRSD 
WTKRTYGKRP GMATPKQVDL IRDLWREWSG ADDDAALNKW LDRHYKVAAL RFATSEVASK
AITGLRSMIQ RRKRGKTAAG GP