Gene RPC_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1554 
Symbol 
ID3971688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1685954 
End bp1686793 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content56% 
IMG OID637924670 
Producthypothetical protein 
Protein accessionYP_531435 
Protein GI90423065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.76039e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0395238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGACGA AAGAACATGC TGAGAACGAT GCGTTTCGCG CAGACGAAAC GGATGTCGAA 
TCCGGGCGCG CGCGATCGAC AATTCAGTTT CCGTATAACG ACCTAGACGA CGCCATATCG
GTCGCGCGGC TTATTCACGC TAATGCCGGG GTCCAGTGCA CCATCGATCA AATTGCAGCC
TACGCTAAAC AATCGATCAC TAGTGGGTCG TTCCGTGTTC GGCTGTCTAC GGCTTCGACG
TTCGGTGTGA CCGAAAACGA GCGCGGCTCG GTCCGCCTGA CCGAAATTGG GCGTCAAATC
GTTGACCCCG CACAGGAAGC GAATGCCCGC GTGGAGGCAT TTCTTCACGT TCCACTCTAC
GCTCGCGTTT TTGAGAATTA TAAGGGGTAT ACACTGCCAC CGGCCGCGGC CCTTGAAAAA
TTCATGCGCG AGGCTGGCGT TGCACCGAAT CAAACGGGCC GTGCTCGGCA AGCCTTTATG
CGATCTGCTC GGCAAGCCGG TTTCTTTGTG CATGGTGAGG ATCGGCTAGT TCGACCGGCG
GGACCCGGCA CGAAGCCGAC CGACCAACAA AAGCCAGACC CAGTAATCGA AAAGCAGGAT
ACCAAATTCG GTGGCGGCGG TGGTGGAGAT GAGCCGCCTG CGATTGACCC AATCATCGCC
GGTCTATTGG CGCGATTACC GAAGTCCGGG GATGTTTGGC CTATTGCTGA GCGCAAGCTG
TGGCTGCAAC TGCTAGAAGG TAGCTTCCAG CTGATTTATA AAGATGGGAG TGCGCAAGTG
CCGCCGCCTC CGGGTGACGC TGAATACCGC AAAACTCAGC AACAGCAGGA AGTGAAATGA
 
Protein sequence
MVTKEHAEND AFRADETDVE SGRARSTIQF PYNDLDDAIS VARLIHANAG VQCTIDQIAA 
YAKQSITSGS FRVRLSTAST FGVTENERGS VRLTEIGRQI VDPAQEANAR VEAFLHVPLY
ARVFENYKGY TLPPAAALEK FMREAGVAPN QTGRARQAFM RSARQAGFFV HGEDRLVRPA
GPGTKPTDQQ KPDPVIEKQD TKFGGGGGGD EPPAIDPIIA GLLARLPKSG DVWPIAERKL
WLQLLEGSFQ LIYKDGSAQV PPPPGDAEYR KTQQQQEVK