| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1488 |
|---|
| Symbol | |
|---|
| ID | 3972272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1624824 |
|---|
| End bp | 1627031 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924603 |
|---|
| Product | flagellin |
|---|
| Protein accession | YP_531369 |
|---|
| Protein GI | 90422999 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.723636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.726949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGCA TTACACTCTC GTCTTCCGTC CGCCAGAACC TGCTCTCTCT GCAGTCGACC
GCGGAACTAC TCTCCTCGAC CCAGAGCCGC CTCTCCACCG GTAAGAAGGT GAACTCGGCG
CTCGACAACC CCACCAACTT CTTCACCGCC TCCGGCCTCG ACGCCCGTGC TTCCGACATC
AACAATCTGT TGGACGGCAT CGGCAACGGC GTGCAGATCC TGCAGGCCGC CAACACCGGC
ATCACCTCGC TGCAGAAGCT GGTGGACTCG GCCAAGTCGA TCGCCAACCA GGCGCTGCAG
ACCGTCGCCG GCTACACCAG CAAGTCCAGC GTCTCGACCA CGATCGGCGG CGCCACCGCC
GACGATCTGC GCGGCACTGC GACCTATTCC AACGGCTCGG CGCAGAGCCT TGCCTTGCAG
GACGGTCAGG CCGCTGCCGG CGTGATTTCC GGCGCGACTC TGCTCGGCGG TACCGCTGCG
ACCAAGACCG GCGCAACGGT CACGGGTCTC GCGACCACCA CCTTGCTGAG CGCGCTCGGC
ACCAACAAGC CGGTAGCCGG CAACAGCCTG ACGGTGAATG GCCACACGGT CACCTTCGCC
AATGGCGACG CGCCGGCCTC GACCACTCTG CCGGCCGGTT CTGGTGTCAA CAATCAGCTG
GTCACCGACG GAAAGGGCAA CTCGACCGTC TATCTGAACA GCGGCACCGT GCAAGACGTG
ATGAACGCCA TCGATCTTGC GAGCGGCGTG CAAAACGCGA CGATCACCGG CGGTGCTGCG
ACGGTGGCAA ACAGCTCGGG TGCCAATGCG TCGATCGCGG CCAACGCGCT GGTGTTCAGC
ACCTCGACTG GTTCGGATCT GTCGATCTCC GGCAACAACA CTCTGCTGTC GGCGTTCGGT
CTGAATTCGG GAGCCACCGG CGTCGGCAGC TTCACGGCTG ATCGAACCGC TACCGCGGCC
GCTGGGGTCG GCGTCAGCCG CGCCGGAATG GTGCAGGCTG GCTCGACCCT GACCGTGAAC
GGCAAGACCA TCACGTTCCA GGACGCGGCT ATCCCGGCCG CTGCTGATTA CGGTTCCGGT
AAAGTGACCG GCAAGAACGT GATCACCGAC GGCAGCGGCA ATTCGACCGT CTACCTGCAG
GGCGGCACGA TGAACGATGT GCTCACCGCC ATCGACATCG CGAGCGGCGC GCAGGTTGCC
CCGGTCAGCA ACGGTGCCGC CACGTTGGCG GTGGCCGCGG GCAGCGAGGC GTCCAAGGTG
CTCTCCGGTG GTCAATTGCA GATCAGCTCG GGCCTGGCAG GCGATCTCAA GCTCTCCGGC
ACCGGCAACG CGCTGTCGGC ATTGGGTCTG GCCGGCGCCC AGGGAACCGG GACCAGCTTC
AACGTGGCCC GCACGGCATC CGCCGGCGGC ATCAGCGGCA AGACGCTGTC GTTCGAATCG
TTCAATGGCG GTACCGCCGT CAACATCACG ATCGGCGACG GCACCAACGG CACCGTCAAG
TCGCTCACCG ACCTGAATAC GGCGCTGAAG GCCAACAATA TGCAGGCCTC GATCGACACC
ACCGGCAAGC TGACGATCTC GGCGGCGAAC GACTACGCCT CCTCGACGCT CGGCTCCACG
CTGTCCGGCG GCAAGATCAG CGGCACCGCG GCGTCGCTCT TCTCGACGCC GACCGACCCT
GTTGCCGACC TGGTCGCCCA GACCACCCGC GGCAACCTGG TCAAGCAGTA CAACGACGTC
ATGGACCAGA TCAAAACCAC GGCCCAGGAC GCTTCGTTCA ACGGCGTCAA CCTGCTCGGC
GGCGACACCC TGAAGCTGGT GTTCAACGAA ACCGGCAAGT CCACCCTGAG CATTCAGGGC
GTGACCTTCG ACCCGACCGG CCTCGGCCTG TCGAAGTTGA CGTCCGGCAC CGACTTCATC
GACAACGCCG CCACCAACAA GACCTTGGCG ACGCTGACCA CCGCTGCAAC CACGCTGCGG
TCGCAGGCTT CGGCTTTGGG TTCCAACCTC TCGATCGTGC AGACCCGTCA GGACTTCTCG
AAGTCCCTGA TCAACGTGCT GCAGACCGGT TCGTCGAACC TGACGCTGGC CGACACCAAC
GAGGAAGCGG CCAACAGCCA GGCGCTGTCG ACCCGCCAGT CGATCGCGGT GTCCGCGCTG
TCGTTGGCCA ACAGCTCGCA GCAGGGCGTG TTGCAGCTGC TGCGCTAA
|
|---|
| Protein sequence | MSGITLSSSV RQNLLSLQST AELLSSTQSR LSTGKKVNSA LDNPTNFFTA SGLDARASDI
NNLLDGIGNG VQILQAANTG ITSLQKLVDS AKSIANQALQ TVAGYTSKSS VSTTIGGATA
DDLRGTATYS NGSAQSLALQ DGQAAAGVIS GATLLGGTAA TKTGATVTGL ATTTLLSALG
TNKPVAGNSL TVNGHTVTFA NGDAPASTTL PAGSGVNNQL VTDGKGNSTV YLNSGTVQDV
MNAIDLASGV QNATITGGAA TVANSSGANA SIAANALVFS TSTGSDLSIS GNNTLLSAFG
LNSGATGVGS FTADRTATAA AGVGVSRAGM VQAGSTLTVN GKTITFQDAA IPAAADYGSG
KVTGKNVITD GSGNSTVYLQ GGTMNDVLTA IDIASGAQVA PVSNGAATLA VAAGSEASKV
LSGGQLQISS GLAGDLKLSG TGNALSALGL AGAQGTGTSF NVARTASAGG ISGKTLSFES
FNGGTAVNIT IGDGTNGTVK SLTDLNTALK ANNMQASIDT TGKLTISAAN DYASSTLGST
LSGGKISGTA ASLFSTPTDP VADLVAQTTR GNLVKQYNDV MDQIKTTAQD ASFNGVNLLG
GDTLKLVFNE TGKSTLSIQG VTFDPTGLGL SKLTSGTDFI DNAATNKTLA TLTTAATTLR
SQASALGSNL SIVQTRQDFS KSLINVLQTG SSNLTLADTN EEAANSQALS TRQSIAVSAL
SLANSSQQGV LQLLR
|
|---|
| |