Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1440 |
Symbol | |
ID | 3973708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1567985 |
End bp | 1568437 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637924555 |
Product | cytochrome c, class II |
Protein accession | YP_531321 |
Protein GI | 90422951 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.675106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTACGAA CCGCCATCGT GATCGGGAGC TTGGTCCTCG GCGCCAGCGT GGTCGTCGCG CAGCAGGATC TGGTCAACCA GACCCAGATG CTGATGAAAG GCAACGGCAA GAATCTCGCC ACCGTGCTGG CGCCGATCGC CAAGGGTGAG AAGCCCTACG ATCAAGCCGC GGTCAATGCG GCGCTGGCGC AGTTCGAAGA CACCGCCAAG AAACTGCCGA CGCTGTTTCC CGCCAGCGTC AAGGGCCTGA AGCCGGCCGA CAGCGATTAT TCGTCGTCGC CGAAGATCTG GGACAGCCGC GCCGATTTCG ACGCCCATAT CGCCAGCTTC ACCAAGGCGG TCGCCGACGC CAAGGCCAAG ATCAAGGATG TCGACACGCT GAAGGTCTCG GTTCAAGCGA TCGGCAAGGA ATGCAGCGGC TGCCACGAAA CGTTCCGGCT GAAGAACACT TAA
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Protein sequence | MLRTAIVIGS LVLGASVVVA QQDLVNQTQM LMKGNGKNLA TVLAPIAKGE KPYDQAAVNA ALAQFEDTAK KLPTLFPASV KGLKPADSDY SSSPKIWDSR ADFDAHIASF TKAVADAKAK IKDVDTLKVS VQAIGKECSG CHETFRLKNT
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