| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1431 |
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| Symbol | |
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| ID | 3973699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1554978 |
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| End bp | 1555958 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924546 |
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| Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
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| Protein accession | YP_531312 |
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| Protein GI | 90422942 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.596658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCTGG TGACCGGAGG GGCCGGTTTT ATCGGGTCGA ACGTCGTGGC CGCGCTGAAC
GACGCCGGCC GCGCCGACGT CGCGGTGTGC GACGTGCTCG GCCACGACGG CAAATGGAAG
AATCTGGCCA AGCGCCAGCT CGCGGATGTC GTGCCGCCGG GCGAGCTGAT GGGCTGGCTG
CAGGGCCGCA GGCTCGACGC CATTATCCAC ATGGGCGCGA TCTCGGAGAC CACCGCGACC
GACGGCGACC TGGTGATCGA GACCAATTTC CGGCTGTCGA TGCGGCTGTT GGACTGGTGC
ACCGCCAACA AGGTGCCGCT GATCTATGCC TCGTCGGCCT CGACCTATGG CGATGGCGAG
CAGGGCTTCA AGGACGATCA ATCCGTCGCC GCGTTGAAAC AGCTGCGGCC GATGAACCTG
TATGGCTGGA GCAAGCATCT GTTCGATCTT GCGGTCGCCG AACGCGCCGC GCGCGGCGAC
CAGTTGCCGC CGCAATGGGC CGGGCTGAAG TTTTTCAACG TGTTCGGCCC CAACGAATAT
CACAAGGGCA GCATGATGAG CGTGCTGGCC AAGCGGTTCG ACGACGTCAA ATCCGGCCGC
GTGGTGCAGT TGTTCAAGTC GCACCGCGCC GGCATCGAAG ACGGCGACCA GCGCCGCGAC
TTCATCTATG TCGACGACGT GGTGCGGGTG ATGACCTGGC TGTTGGCGAC GCCGTCGGTC
AGCGGCATCT TCAACGTCGG CACCGGGCAT GCCCGCAGCT TCCGCGACCT GATCCTGTCG
GCCTATGCGG CGCTCGGCGC CAAGCCGAAC ATCGAATATA TCGACATGCC GGAAAGCATT
CGCGGCAGCT ACCAATACTT CACCGAGAGC GAAGGCGAGC GGTTGCGCGC CGCCGGCTAC
AATGGCGGCT TCACCGCGCT GGAAGACGCG GTCGCGCACT ACGTCAAAGG CTTCCTCGAC
GCCGAGGACC GCTTCCGGTG A
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| Protein sequence | MLLVTGGAGF IGSNVVAALN DAGRADVAVC DVLGHDGKWK NLAKRQLADV VPPGELMGWL
QGRRLDAIIH MGAISETTAT DGDLVIETNF RLSMRLLDWC TANKVPLIYA SSASTYGDGE
QGFKDDQSVA ALKQLRPMNL YGWSKHLFDL AVAERAARGD QLPPQWAGLK FFNVFGPNEY
HKGSMMSVLA KRFDDVKSGR VVQLFKSHRA GIEDGDQRRD FIYVDDVVRV MTWLLATPSV
SGIFNVGTGH ARSFRDLILS AYAALGAKPN IEYIDMPESI RGSYQYFTES EGERLRAAGY
NGGFTALEDA VAHYVKGFLD AEDRFR
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