| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1409 |
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| Symbol | |
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| ID | 3973060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1536193 |
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| End bp | 1537146 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924524 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_531290 |
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| Protein GI | 90422920 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.419031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGGCA AGAACGGCTC GATCAAGCTG GTGGCCGGCA ATTCCAATCG CGCGCTGGCG
CAGGAAATTT CCAACTGGCT CGGCCTGCCG CTGACCAAGG CCGTGGTGCG GCGCTTCGCC
GACATGGAAA TCTTCGTCGA GATCCAGGAA AACGTCCGCG GCTCCGACGT CTTCGTGATC
CAGTCGACCT CGTTTCCGGC CAACGACCAT CTGATGGAAC TGTTGATCAT CACCGATGCG
CTGCGCCGGG CTTCCGCGCG CCGCATCACC GCGGTGATCC CGTATTTCGG CTACGCCCGG
CAGGACCGCA AGGCCGGCCC GCGCACCCCG ATTTCCGCCA AGCTGGTCGC CAACCTGATC
ACCCACGCCG GCGCCGACCG GGTGATGACG CTCGACCTGC ACGCCGGCCA GATCCAGGGC
TTCTTCGATA TCCCGACCGA CAATCTCTAC GCCTCGCCGG TGATGGTGCG CGATATCCGC
GATCGCTTCG ACCTCGGCAA GGTGATGGTG GTGTCGCCCG ACGTCGGCGG CGTGGTGCGC
GCCCGCGGCC TCGCCAAGCG CATCAACGCG CCGCTAGCGA TCATCGACAA GCGCCGCGAA
CGCGCCGGCG AATCCGAAGT GATGAACGTG ATCGGCGAAG TCGAGGGCTA CACCTGTATC
CTGGTCGACG ACATCGTCGA CTCCGGCGGC ACGCTGGTGA ATGCCGCCGA CGCGCTGCTC
GCCAACGGCG CGGTCGAAGT CTACGCCTAC ATCACCCATG GCGTGTTGTC CGGCGGCGCC
GCGACGCGGA TCATCGGCTC CAAGCTGAAA GAGCTGGTGA TCACCGATTC GATCCAGCCC
ACCGAAGCGG TGCGCACCAC CACCAACATC CGCACGCTGT CGATCGCCTC GCTGATCGCC
GAAGCGATCG GCCGCACCGC GTCCGAAGAG TCGGTGTCGA GCCTGTTCGA CTAA
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| Protein sequence | MSGKNGSIKL VAGNSNRALA QEISNWLGLP LTKAVVRRFA DMEIFVEIQE NVRGSDVFVI
QSTSFPANDH LMELLIITDA LRRASARRIT AVIPYFGYAR QDRKAGPRTP ISAKLVANLI
THAGADRVMT LDLHAGQIQG FFDIPTDNLY ASPVMVRDIR DRFDLGKVMV VSPDVGGVVR
ARGLAKRINA PLAIIDKRRE RAGESEVMNV IGEVEGYTCI LVDDIVDSGG TLVNAADALL
ANGAVEVYAY ITHGVLSGGA ATRIIGSKLK ELVITDSIQP TEAVRTTTNI RTLSIASLIA
EAIGRTASEE SVSSLFD
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