Gene RPC_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1387 
Symbol 
ID3973308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1511995 
End bp1512552 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID637924502 
ProductMarR family transcriptional regulator 
Protein accessionYP_531268 
Protein GI90422898 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.207985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.461788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TAAATTTCGC GAACCCGTCG TCACGCTCTG GCCACCCGGA GGCAGGGCCA 
TCGCCGCTGT CCGATGGCGC CTCCCCGCGA TGGGACGTCA TCGAGCTGCT GTTCTTCGCC
TATCGCGACT TTGTCGGCGA TGCCGATCAC GCGCTGGAGG GCTTGGGATT CGGCCGCGCC
CACCACCGCG TCGTGCACTT CGTCCACCGC TATCCCGGGC TGAAAGTCGC CGACCTGCTG
GAGGTGCTGC GCATCACCAA GCAGTCGCTC GGCCGGGTGC TCAAACAACT GCTCGACGAG
GGCTACATCG TGCAGAAAGC TGGCGACAGC GACCGCCGGC AGCGGCTGTT GTTTTCCACC
GCCAAGGGCG AGGCGCTGGT GGTGAAACTG GCGCGGCTGC AAACCGATCG CATCAACCAT
GCGCTGGCCG ATCTCGGCCC CGGCGAGACG GATGCGGTGC TGCGCTTTCT TCGTGCCATG
ATCGACCGCG ATGATCCGGA CAAAGTGCTC GAGGGACTGC TCGGCACCAA TGGCGCAACC
GCAAAGGACC GACGGTGA
 
Protein sequence
MADINFANPS SRSGHPEAGP SPLSDGASPR WDVIELLFFA YRDFVGDADH ALEGLGFGRA 
HHRVVHFVHR YPGLKVADLL EVLRITKQSL GRVLKQLLDE GYIVQKAGDS DRRQRLLFST
AKGEALVVKL ARLQTDRINH ALADLGPGET DAVLRFLRAM IDRDDPDKVL EGLLGTNGAT
AKDRR