Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1387 |
Symbol | |
ID | 3973308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1511995 |
End bp | 1512552 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637924502 |
Product | MarR family transcriptional regulator |
Protein accession | YP_531268 |
Protein GI | 90422898 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.207985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.461788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA TAAATTTCGC GAACCCGTCG TCACGCTCTG GCCACCCGGA GGCAGGGCCA TCGCCGCTGT CCGATGGCGC CTCCCCGCGA TGGGACGTCA TCGAGCTGCT GTTCTTCGCC TATCGCGACT TTGTCGGCGA TGCCGATCAC GCGCTGGAGG GCTTGGGATT CGGCCGCGCC CACCACCGCG TCGTGCACTT CGTCCACCGC TATCCCGGGC TGAAAGTCGC CGACCTGCTG GAGGTGCTGC GCATCACCAA GCAGTCGCTC GGCCGGGTGC TCAAACAACT GCTCGACGAG GGCTACATCG TGCAGAAAGC TGGCGACAGC GACCGCCGGC AGCGGCTGTT GTTTTCCACC GCCAAGGGCG AGGCGCTGGT GGTGAAACTG GCGCGGCTGC AAACCGATCG CATCAACCAT GCGCTGGCCG ATCTCGGCCC CGGCGAGACG GATGCGGTGC TGCGCTTTCT TCGTGCCATG ATCGACCGCG ATGATCCGGA CAAAGTGCTC GAGGGACTGC TCGGCACCAA TGGCGCAACC GCAAAGGACC GACGGTGA
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Protein sequence | MADINFANPS SRSGHPEAGP SPLSDGASPR WDVIELLFFA YRDFVGDADH ALEGLGFGRA HHRVVHFVHR YPGLKVADLL EVLRITKQSL GRVLKQLLDE GYIVQKAGDS DRRQRLLFST AKGEALVVKL ARLQTDRINH ALADLGPGET DAVLRFLRAM IDRDDPDKVL EGLLGTNGAT AKDRR
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