| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1304 |
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| Symbol | |
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| ID | 3972506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1418244 |
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| End bp | 1419446 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924414 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_531185 |
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| Protein GI | 90422815 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAA ATCGAGAACT CTTTGATGTC GTCGTGGTCG GCGGCGGTCC CGCGGGAGCG
ACGGCGGCGC ACGATTTGGC CAAGGACAGC CGCAAGGTGC TGCTGCTCGA TCGGGCCGGC
CGCATCAAGC CCTGCGGCGG CGCGATCCCG CCACGGCTGA TCCGCGACTT CAACATTCCC
GACCACATGA TCGTCGCCAA GATCAATTCG GCGCGGATGG TGTCGCCGTC CGATCACCGC
GTCGATATGC CGATCGACGG CGGTTTCGTC GGAATGGTCG ATCGCGCGGT GTTCGACGAG
TGGCTGCGCA AGCGCGCCGC CGACGGCGGC GCCGAACGGC GAACCGGTCT TTACAAGCGC
CTCGAGCACG AAGACGGCGG CACCACGCTG GTGCATTACG ACGAACGTTC GTCGGATGGC
ACGATGGTGG AGAAGACCGT CCGCACCCGC GCCGTGATCG GCGCCGACGG CGCATTGTCG
GCGGTGGCAC GGCAGTGCAT TCCCGATGCC GACAAGATGC CGTTCGTGTT CGCCTATCAT
GAGATCGTAC GGGCGCCGAA AAACGCCGAC GGGCTGTACG ATGCGGAGCG TTGCGACGTC
TATTACCGGG GCACGGTGTC GCCGGATTTC TACGGCTGGG TATTCCCTCA TGGCGACACG
GTCAGCGTCG GCACCGGCTC GGCGCACAAA GGGTTTTCGT TGCGGGAGTC GGTCGGCGCG
CTGCGCGACG CCGCGGGGCT GAGCGACGTC GAGACGATCC GCAAGGAAGG CGCGCCGATT
CCGCTGCATC CGTTGCCGCG TTGGGATGAC GGACGCAACG TGCTGTTGGC CGGCGATGCC
GCCGGCGTCG TGGCGCCGGC GTCGGGCGAA GGCATCTATT ATGCGATGCT GGGCGGCCGT
CTGGCTGCGG ATGCGATCGA TCAGTTCCTG GAAACCGGCG ACGTCGCCGC GCTGGCCACC
GCCCGCAAGC GCTTCATGCG CGCCAACGGC ACGGTGTTCT GGATCCTCGG CCTGATGCAG
AAATATTGGT ACTCGAACGA CAAGCGCCGC GAGCAGTTCG TCAGCATCTG TCGCGACCGC
GACGTCCAGA AGCTGACTTG GGACGCCTAT ATGAACAAGA AGCTAGTGCG CGCCAAACCG
ATCGCGCATG TCCGGATCTT CTTCAAAAAT CTCGCGCATA TGACGGGGTT GGCTTCGGCA
TAA
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| Protein sequence | MTENRELFDV VVVGGGPAGA TAAHDLAKDS RKVLLLDRAG RIKPCGGAIP PRLIRDFNIP
DHMIVAKINS ARMVSPSDHR VDMPIDGGFV GMVDRAVFDE WLRKRAADGG AERRTGLYKR
LEHEDGGTTL VHYDERSSDG TMVEKTVRTR AVIGADGALS AVARQCIPDA DKMPFVFAYH
EIVRAPKNAD GLYDAERCDV YYRGTVSPDF YGWVFPHGDT VSVGTGSAHK GFSLRESVGA
LRDAAGLSDV ETIRKEGAPI PLHPLPRWDD GRNVLLAGDA AGVVAPASGE GIYYAMLGGR
LAADAIDQFL ETGDVAALAT ARKRFMRANG TVFWILGLMQ KYWYSNDKRR EQFVSICRDR
DVQKLTWDAY MNKKLVRAKP IAHVRIFFKN LAHMTGLASA
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