Gene RPC_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1299 
Symbol 
ID3972501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1412555 
End bp1413388 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content59% 
IMG OID637924409 
Productphotosynthetic reaction center subunit L 
Protein accessionYP_531180 
Protein GI90422810 
COG category 
COG ID 
TIGRFAM ID[TIGR01157] photosynthetic reaction center L subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGC TCAGCTTTGA GAAAAAATAC CGCGTTCGCG GCGGAACGCT TATCGGGGGG 
GACCTGCTCG ATTTCTGGAT TGGTCCCTTC TACGTCGGTT TCTTTGGGGT CGCGACGGTC
TTTTTTGCAG TCCTCGGCGT CGCGCTGATC CTGTGGAATA CCGCGCTCGG CCCCACCTGG
AATTTGTGGC AGATCAGCGT CAACCCGCCG GACGTTAAAT ACGGACTTGG ATTTGCTCCT
CTTGCCGAGG GCGGCATTTG GCAGTGGGTT ACGATCTTCG CCTGGTGCGC GTTCGTGTCG
TGGGCGCTGC GCGAGGTCGA AATCTGCCGT AAACTTGGTA TCGGCTTCCA TGTCCCGTTC
GCATTCAGCT TCGCGATCTT TGCTTACACG ACCCTGGTTG TGATCCGCCC GGTTCTGATG
GGTTCCTGGA GCTACGGCTT CCCCTACGGC ATTTTCACGC ATCTCGATTG GGTGTCGAAC
ACCGGCTATC AGTACGGCCA ATTCCACTAC AACCCGGCCC ACATGATCGC GATCACGTTC
TTCTTCACGA CGTGTCTCGC GCTGGCTCTG CATGGCGGCC TGGTTCTGTC GGCGACCAAT
CCCGACCGCG GCGAACCCGT CAAATCGCCC GAGCATGAGA ATACCGTGTT CCGCGATCTG
GTCGGCTACT CGATCGGCAC CATCGGCATC CATCGCGTCG GTCTGTTCAT CGCGCTGTGT
GCCGTTTTCT TCAGCGCGGT CTGCATGCTG CTCTCCGGTC CGGTGTTGTC CGAAGGCGGT
TCCTGGCCCG ATTGGTGGGA ATGGTGGCGT CGTCTCCCGG TCTGGAGCTC CTAA
 
Protein sequence
MAMLSFEKKY RVRGGTLIGG DLLDFWIGPF YVGFFGVATV FFAVLGVALI LWNTALGPTW 
NLWQISVNPP DVKYGLGFAP LAEGGIWQWV TIFAWCAFVS WALREVEICR KLGIGFHVPF
AFSFAIFAYT TLVVIRPVLM GSWSYGFPYG IFTHLDWVSN TGYQYGQFHY NPAHMIAITF
FFTTCLALAL HGGLVLSATN PDRGEPVKSP EHENTVFRDL VGYSIGTIGI HRVGLFIALC
AVFFSAVCML LSGPVLSEGG SWPDWWEWWR RLPVWSS