Gene RPC_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1267 
Symbol 
ID3973024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1382593 
End bp1384014 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content67% 
IMG OID637924377 
Productradical SAM family protein 
Protein accessionYP_531148 
Protein GI90422778 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.361932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.190487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC CATTCCAATT GGCGTCCGGA ACGGCCCCCT CGCGGGGCCG TTTCACTAAC 
AGCGGCGCCG GTCCCACCAT CCAGCCCTAC GACATCGGCC ATGATAGCCA CATCGCGCTG
ATCTCGCCGG ACACCGCGTT CTGGTCGCTG GTGCGCAAGG ATCAGCTCGC CGAAACGCTG
TTGGGCGGGC CGCTGCTCGA CGGCTACCGC GAAAAGGCCG ACGAGTTCGC CCGCGAGATG
CAGGCGCTGC GGTTCGGGCT GAAGCCGTCG GCGGTCTATG TCAACGCCAC CGAGCGCTGC
AATCTGAACT GCACCTATTG CTACATCCCG GCCGATATGC GCCGCGACGG CATCGACATG
GACGGCCCGA CGCTGCTGAA GGCGCTGGAC ACGCTCGACC GCTATTTCAG CCGCCATATG
CCGGCCGACC GCCGGCCGCA GATCATCTTC CACGGCGCCG AACCGTTGAT CGCGCGCGAG
GCGATCTTCG CGGCGATCGA CGCCTTCAAG GACCGCTTCC GCTTCGGGCT GCAGACCAAC
GCCACGCTGC TGACCGATAA GGCCGCCGAG TTCCTGACCT CGCGCGGCGT CGGCATCGGG
CTGTCGCTCG ACGCGCCGGT CGAGGCGATC GCCGATCGCA CCCGCGCCAA TTGGGGCGGC
GTCGGCGTAT TCGGCAAGGT GGTGGAGGCG ATCGAACGGC TGAAGGGCTA TCCGGCGTTC
AACGTGATCT GCACCATGAG CTCGCAGAAT CTCGATCAGC TGACGCCGAT GGTGGAATTC
CTGCACCAAC GCGAAGTGCC GGCCTGCATG CTCAACGTGA TCCGCTGCAC GCTGCCCGGC
GCCCGCACGG TGCGGCCCGA CGACGCGCCG CTCGCCGAAG CGTTCATCGG CGCGTTGGAG
CGCAGCCACG CGCTGTATCG GCAGACCGGG CGGAAGCTGG TGGTCGCCAA TTTCGCCAAC
ATCCTGATCG GCATTCTGGC GCCGACCGCG CGGCGGCTGA TGTGCGACAT CTCACCCTGC
GGCGGCGGCC GGGCGTTCTT TGCGCTGGCG CCGAACGGCG ATCTGTTTCC GTGCAGCGAG
TTCATCGGGC TGCCGGCGTT CAACGGTGGC AACCTGTTTC GCGACGACAT CGAGGACGTG
TTGCAGACGC CGGCGTTTGC CGCGGTCACC GGCCGCAAGG TCGAGGACAT CGCGCCGTGT
CAGAACTGCG CGATCCGGCA CTTCTGCGGC TCGCCCTGCC CGGCCGAGGC GCATGAGATG
AACGGCGGCA TGACGCAGAC CGGCGCCTAT TGCGAGTTCT ACGAGGAGCA GACCCGCTAC
GCGTTCCGGC TGATCGCCGA CGACCGCCAT GGCGATTTTT TGTGGGACGG CTGGGATGAG
GGGGCCGCCA CCAGCTTCGA CGCGGCGCAG TTGGGGTGCT GA
 
Protein sequence
MNAPFQLASG TAPSRGRFTN SGAGPTIQPY DIGHDSHIAL ISPDTAFWSL VRKDQLAETL 
LGGPLLDGYR EKADEFAREM QALRFGLKPS AVYVNATERC NLNCTYCYIP ADMRRDGIDM
DGPTLLKALD TLDRYFSRHM PADRRPQIIF HGAEPLIARE AIFAAIDAFK DRFRFGLQTN
ATLLTDKAAE FLTSRGVGIG LSLDAPVEAI ADRTRANWGG VGVFGKVVEA IERLKGYPAF
NVICTMSSQN LDQLTPMVEF LHQREVPACM LNVIRCTLPG ARTVRPDDAP LAEAFIGALE
RSHALYRQTG RKLVVANFAN ILIGILAPTA RRLMCDISPC GGGRAFFALA PNGDLFPCSE
FIGLPAFNGG NLFRDDIEDV LQTPAFAAVT GRKVEDIAPC QNCAIRHFCG SPCPAEAHEM
NGGMTQTGAY CEFYEEQTRY AFRLIADDRH GDFLWDGWDE GAATSFDAAQ LGC