Gene RPC_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1241 
Symbol 
ID3972034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1356745 
End bp1357401 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID637924351 
Producthypothetical protein 
Protein accessionYP_531122 
Protein GI90422752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00985067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.32118e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCCAAA TCACCCGATT GTATGACACC AGCAGGCAGA TCTCGGCGAT CGAGACCGAA 
CTGAAGAGCG CCAGCTTCAA ATACGCCGTC GTCACCAGCG CGCAGCCCGG CAAGCCCGGC
ACGACACTCG ACGAGACCAT TCTGGCCGCG CTGGTGCGGG CCGGCGTGTC GCGCGGTGAA
GGCCGTTCCT ATGTCGAGGC CATCAAGAAG GGCGGCGCGG TGGTTTCGGT TCAGGCCGAA
TTCGGATTCG GCGCCAAGGC GTCCGCGATC CTGGATCGCT ACAGCCCGAA CAAGGCCAGC
ATCCCGAGTT CGTCGACCGG CAGCGTCGAG ATCGACGATG CGACGCCGTT CTCCAATATC
CTGCACGCGC CGGTGCTGCT GGATAACTCG GGGCCATACG AATCCTACTC CGGTACCCCG
CTGTTGGTGG ATAGCAACAA GACGTATTCC GGTACCCCGT TATTGGTCGA TAGCCAAAAG
ACCTATTCCG GCACGCCGCT TCTGCTTGAT AGCAAGGGAC CGTACAAATC TTTCTCCGGC
ACCCCTCTGC TGCTCGATAC CGAGGGATCT TACAAGTCGT ATTCCGGCAC ACCGCTCCTG
ATCAACAATC CGACCCCGCT GTCGTCCTGG CTGGGTCTTC CTGTCCTCTC AAAGTAG
 
Protein sequence
MTQITRLYDT SRQISAIETE LKSASFKYAV VTSAQPGKPG TTLDETILAA LVRAGVSRGE 
GRSYVEAIKK GGAVVSVQAE FGFGAKASAI LDRYSPNKAS IPSSSTGSVE IDDATPFSNI
LHAPVLLDNS GPYESYSGTP LLVDSNKTYS GTPLLVDSQK TYSGTPLLLD SKGPYKSFSG
TPLLLDTEGS YKSYSGTPLL INNPTPLSSW LGLPVLSK