Gene RPC_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1240 
Symbol 
ID3972033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1355294 
End bp1356748 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content67% 
IMG OID637924350 
ProductPUCC protein 
Protein accessionYP_531121 
Protein GI90422751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000359132 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.83623e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACCCTG TCAGTCAAAA AGCGATGAAG GCCTGGATAT CGTTGGGGAC GCGCTTCCTG 
CCGTTCGCGG ATGCGGCGAC CCCGGACTTG CCGCTGTCGC GGCTGCTGCG GCTCTCCCTG
TTTCAAGTCT CGGTCGGAAT GTCCCTGGTG CTGCTGGTCG GCACGTTGAA CCGGGTGATG
ATCGTCGAGT TAAACGTGCC GGCGTCGATC GTCGGCATCA TGATTTCGCT GCCGCTGATC
TTTGCGCCGT TTCGGGCGCT GATCGGCTTT CGCTCCGACG TCCATAAGTC CGTGCTCGGC
TGGAAGCGGG TGCCGTTCCT CTACAAGGGC ACCATGGTGC AGTTCGGCGG GCTGGCGATC
CTGCCGTTCG CGCTGTTGGT GCTGTCGGGC GGCGGCGAAG CCGGCCATGC CCCGGTGTGG
ATCGGGCAGG CCGCCGCGGC GATCGCCTTC CTGCTGATCG GCGCCGGCGT GCACACCACC
CAGACCGTCG GGCTCGCGCT CGCCACCGAT CTGGCGGCGC CGGAATCGCG GCCCAAGGTC
GTCGGCCTGA TGTATGTCAT GCTGCTGTTC GGCATGATCG CCAGCGCTTT CATCTTCGGC
GCGCTGCTGG CGGATTTCTC GCCCGGCCGT CTGATCCAGG TGATCCAGGG CGCGGCGGTG
GTCACCATCG TGCTGAACGG CATCGCGGTC TGGAAGCAGG AAACCCGGCG CTCCGGCGCC
GCCGCGCAGG CCGCGCAGCA GCCGCGCACG CCTGGCTTCC GCGAAACCTG GGACGCCTTC
ATCGCCGGCG ACAACGCGCT GCGCCGATTG GTTGCCGTCG GCCTCGGCAC CATGGCGTTC
AGCATGGAAG ACGTGCTGCT GGAGCCGTTC GGCGGCCAAA TTCTTCATCT CGCGGTGGGC
GACACCACCA AGCTCACCGC GGCGCTGGCG CTCGGCGGCC TGTTCGGCTT CGCTCTGGCC
TCGCGCGTGC TCAGCCGCGG CGCCGATCCG TTCCGGATGG CGAGCTATGG CGCCCTGGTC
GGCATTCCGG CGTTTCTCGC GGTGATCTTC GCCGCCCCCT TGATGTCAGC CTTGCTGTTC
GGCGCCGGCA CCTTCCTGAT CGGCTTCGGC GCCGGCTTGT TCGGTCACGG CACGTTGACC
GCGACCATGA ATGCCGCGCC GAAGCATCAG GCCGGCCTGG CGCTCGGCGC CTGGGGCGCG
GTGCAGGCCT CGGCCGCCGG CATTGCGATC GCGCTCGGCG GCGTGCTGCG AGATCTCGTC
GATGCGATCG CACCCCACAC CTCGCTTGGC GCCGCCGCGG GCTATGATTT CGTCTATTGC
CTCGAAATCG TTCTGCTGTT GGCGACGCTC ATCATCATGG TCCCGCTCAT TCGACAACCC
GGAGCCTATG CCGGAGCGGG GCAGCTTCTG ACACGGCCAC CGATCGGCCT TGAGACTGAA
ACGGAGAAGT CATGA
 
Protein sequence
MNPVSQKAMK AWISLGTRFL PFADAATPDL PLSRLLRLSL FQVSVGMSLV LLVGTLNRVM 
IVELNVPASI VGIMISLPLI FAPFRALIGF RSDVHKSVLG WKRVPFLYKG TMVQFGGLAI
LPFALLVLSG GGEAGHAPVW IGQAAAAIAF LLIGAGVHTT QTVGLALATD LAAPESRPKV
VGLMYVMLLF GMIASAFIFG ALLADFSPGR LIQVIQGAAV VTIVLNGIAV WKQETRRSGA
AAQAAQQPRT PGFRETWDAF IAGDNALRRL VAVGLGTMAF SMEDVLLEPF GGQILHLAVG
DTTKLTAALA LGGLFGFALA SRVLSRGADP FRMASYGALV GIPAFLAVIF AAPLMSALLF
GAGTFLIGFG AGLFGHGTLT ATMNAAPKHQ AGLALGAWGA VQASAAGIAI ALGGVLRDLV
DAIAPHTSLG AAAGYDFVYC LEIVLLLATL IIMVPLIRQP GAYAGAGQLL TRPPIGLETE
TEKS