Gene RPC_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1236 
Symbol 
ID3969113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1353328 
End bp1353585 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content67% 
IMG OID637924347 
Producthypothetical protein 
Protein accessionYP_531118 
Protein GI90422748 
COG category[S] Function unknown 
COG ID[COG4309] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000489654 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.65083e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCCGACA GCGACGACAC CGAGACCGTG CTCGACGTGC GCCGGCTCGA GCCGCAGCAG 
CGCCACGCCA TCGTCCAGCG GCTGATCGAT CGGCTGCCGC CGGGCCGCAG CCTGCAAGTG
ATAGCCGATC ACAATCCGCG ACCGCTGCGC GGCTATCTCG AGATGGTGCA CGGCGACGAA
GCCGATTGGA GCTATCTCGA ACAGGGCCCG GAGGTCTGGC GGGTCAAGCT GCGCCGGGGC
GTTGCATCAG CACTCTGA
 
Protein sequence
MSDSDDTETV LDVRRLEPQQ RHAIVQRLID RLPPGRSLQV IADHNPRPLR GYLEMVHGDE 
ADWSYLEQGP EVWRVKLRRG VASAL