Gene RPC_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1233 
Symbol 
ID3969110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1349326 
End bp1350978 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content66% 
IMG OID637924344 
Productphosphoglucomutase 
Protein accessionYP_531115 
Protein GI90422745 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000642189 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGCGG AAGTCAGTCC GCTCGCCGGC CACATCATTG ACTCGTCAAT GCTGGTCAAC 
GTGCCGCGTT TGGTCACGGC GTATTTCGCC GGCCGGCCCG ATCCGGCGAT CCCGGCGCAA
CGCGTGGCGT TCGGCACCTC GGGCCACCGC GGTTCGGCCT TCAACAATGC TTTCAATGAG
GCGCACATTC TGGCAGTGAG CCAGGGCGTG TGTGAATACC GGCGCCGCGC CGGCATCGAC
GGGCCGTTGT TCATCGGCAT CGACACCCAC GCGCTGGCGG AGCCCGCGCT GGCCAGCGCG
CTCGAAGTGT TCGCCGCCAA CGGCGTCGAG GTGATGATCG ACGAACACGA CGGTTACACC
CCGACCCCGG CGATCTCGCA CGCCATCCTG AGCTACAACC GCGGCCGGAC CAGCGGTCTC
GCCGACGGCG TGGTGATCAC GCCGTCGCAC AATCCGCCGG AGGACGGCGG CTTCAAATAC
AATCCGCCGA ACGGCGGCCC GGCCGACACC GACATCACCA GCGACATCGA ACGCACCGCC
AACGCGTTGC TCGAGGACGA CTTGCGCGGC GTCAAGCGGA TCACGCTGGA TCGCGCGCTA
CGCTCGGCCA ACGTGCACCG CCACGATTAT GTCGGACCCT ACGTCGCCGA TCTGGAAAAC
GTCATCGACA TGGCGGCGAT CAAGGCCTCC GGCGTCAAGA TCGGCATCGA TCCGTTGGGC
GGCGCCGCGG TGCATTATTG GCAGCCGATC ATCGAGCGCT ACGGCATCGA CGCCAGCATC
GTCAGCGACG TGGTCGATCC GACCTTCCGC TTCATGACCG CGGATTGGGA CGGCAAGGTG
CGAATGGACT GCTCCTCGCC CTATGCGATG GCGCGGCTGA TCGGGATGCG CGACAAGTTC
GATGTCGCCT TCGCCAACGA CACCGACGCC GACCGCCACG GCATCGTCGC CCGCTCCTGC
GGCCTGCTCA ACCCGAACCA CTATCTCGCA GTGGCGATCG ATTATCTGTT CCAGCACCGT
CCGGGCTGGC GCGCCGACAG CGCGATCGGC AAGACCATCG TCTCCAGCGG CTTGATCAAC
CGCGTCGCCA CCAGACTCGG TCGCAAGCTG GTCGAGACCC CGGTCGGCTT CAAATGGTTC
GTCAACGGCC TGGTTGACGG CTCGTTCGGC TTCGGCGGCG AGGAGAGCGC CGGCGCCTCG
TTGCTGCGCC GCGACGGCAC GGTGTGGACC ACCGACAAGG ACGGTCTGAT CCTCGGCCTG
CTCGCCGCCG AGATCACCGC GACCACCAAA TCCGATCCGG GAGAACACTA TCAGAAGCTC
GCGCAGGAGC TCGGCCGGCC CTATTACGAG CGAATCGACG CCCCGGCGAG CCGCGAGCAG
AAGGCCAAGT TCAAGACGCT GACCGCGGAG ACGCTCGGCC TCAAGCAATT GGCCGGCGAG
CCGATCGAGG CGGTGATGAC CAAAGCGCCC GGCAACGATC AGCCGTTCGG CGGCGTCAAA
GTGGTCACCG CGAACGGCTG GTTCGCGGCG CGCCCCTCCG GCACCGAGGA CGTCTACAAG
ATCTACGCCG AAAGCTTCCG CGGCCAGGAT CATTTGCGGC AGATCCAGCA GGAGGCGCAA
AGCGCGTTGT CTGCGGTGTT CGCGAAGGGG TGA
 
Protein sequence
MVAEVSPLAG HIIDSSMLVN VPRLVTAYFA GRPDPAIPAQ RVAFGTSGHR GSAFNNAFNE 
AHILAVSQGV CEYRRRAGID GPLFIGIDTH ALAEPALASA LEVFAANGVE VMIDEHDGYT
PTPAISHAIL SYNRGRTSGL ADGVVITPSH NPPEDGGFKY NPPNGGPADT DITSDIERTA
NALLEDDLRG VKRITLDRAL RSANVHRHDY VGPYVADLEN VIDMAAIKAS GVKIGIDPLG
GAAVHYWQPI IERYGIDASI VSDVVDPTFR FMTADWDGKV RMDCSSPYAM ARLIGMRDKF
DVAFANDTDA DRHGIVARSC GLLNPNHYLA VAIDYLFQHR PGWRADSAIG KTIVSSGLIN
RVATRLGRKL VETPVGFKWF VNGLVDGSFG FGGEESAGAS LLRRDGTVWT TDKDGLILGL
LAAEITATTK SDPGEHYQKL AQELGRPYYE RIDAPASREQ KAKFKTLTAE TLGLKQLAGE
PIEAVMTKAP GNDQPFGGVK VVTANGWFAA RPSGTEDVYK IYAESFRGQD HLRQIQQEAQ
SALSAVFAKG