Gene RPC_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1195 
Symbol 
ID3969150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1309170 
End bp1310828 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content68% 
IMG OID637924306 
ProductSulfate-transporting ATPase 
Protein accessionYP_531077 
Protein GI90422707 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CGATCCTCGA CATCGAAAAC CTCGTGGTCG GGCTCGGCCG CAATCCCGGC 
GGCGAGCGGG TGATCGACGG GCTGTCGCTG CAGCTCGCGC AGGGCGAGAC GCTGTGCCTG
GTCGGTGAAT CCGGCTCCGG CAAATCGGTG ACTTCGCTCA CCACGATGGG GCTGTTGCCG
AAGGGTGCGC TGGTGGCGAA TTCCGGCCGC ATCCGGCTGG TCGGCGAGGA CGTGCTCGGC
GCCAGCGATC GCCGCTTGCG GCAGCTCCGC GCCACCACCA TGGCGATGAT CTTTCAGGAG
CCGATGACCG CGCTCAATCC GGTGGTGCCG GTCGGCCGCC AGATCGACGA GGTGCTGCGG
GTGCACACCG ATCTCGACGC CCGCGCCCGC AAAAAGCGCA TCCTCGCCAT GATGGAGCAG
GTGCGGCTGC CGGACGTCGA ACGGATCTTC CGCGCGTTTC CGCATCGTTT GTCCGGCGGC
CAGCGCCAGC GCATCATGAT CGCGATGGCG CTGGTGCTCG AACCGAAACT GCTGATCGCC
GACGAACCGA CCACCGCGCT CGACGTCACC ACGCAGAAGC AAATCCTGAC GCTGATCCGC
GACCTGCAGA AAGATCACGG CACCGCGGTG CTGTTCATCA CCCACGACAT GGGCGTGGTC
GCCGAGATCG CAGATCGCGT CGCGGTGATG CGGCACGGCC GGCTGGTGGA GACCGGCACG
CTCGACCAGG TGCTGCGCGC GCCCGCGATG GAGTACACCC GCAAACTGTT GTCGGCGGTG
CCGAGCCTGG TGCCGCGGCC GCCGCGGCCG GAGAGCTTTG CGCCGGTGGT GCTGGAAGCC
AGCGAACTCG GCAAAGTGTA TCGCGAGCGC GCGATGTTCG GCCGCGCCCG CGAAGTGGTG
GCCGCGCAAG ACGTCTGGCT GACGCTGCGC AAGGGCCGCA CGCTGGGCAT CGTCGGCGAA
TCCGGCTCCG GCAAATCCAC CGTGGCGCGC TGCATCGTGC GGCTGATCGA TCCGACCTCC
GGCGGCGTAC GGCTGGTCGG CCGCGAGATT TCCAACTTGT CGCGCCGGCT GCTGCAGCCG
CACCGGCAGA AGATCCAGAT CGTGTTCCAG GATCCCTATC GCTCGCTCAA TCCGCGGATC
AGCATCGGCG AGAGCATCGC CGAAGGGTCG ATCAACTACG GCATGTCGCA CAAGGACGCG
CTGGCCAAGG CCCGCGAGCT ATTACAGCTG GTCGATCTGC CGGCGGATGC GATTTCGCGG
TTTCCGCATC AGTTCTCCGG CGGCCAGCGC CAGCGCATTG CGATCGCCCG CGCGCTGGCG
CTCGATCCCG ACGTGCTGGT CGCCGACGAA GCGGTGTCGG CGCTCGACGT CTCGGTGCAG
GCGCAGGTGC TGGAACTGCT GGCCGACATC CAGACCCGGC TCGGCATCGC GCTGTTGTTC
ATCACCCACG ATCTGCGCGT CGCAGCCCAG ATCTGCGACG ACGTCGCGGT GATGCAGCAG
GGCCGAATCG TCGAACAGGG CCCGGCCGGC GAGATTCTGA CCCATCCGCG CCAGGCCTAC
ACAAGACAGT TACTTGACGC GGCGCCCGGC CGCGGCTGGG ATTTTGCCAA TTTCCGGCCG
GTCGAGGCCC CGATTGCGGA TGCGAGGGTC GGCCTGTGA
 
Protein sequence
MTAPILDIEN LVVGLGRNPG GERVIDGLSL QLAQGETLCL VGESGSGKSV TSLTTMGLLP 
KGALVANSGR IRLVGEDVLG ASDRRLRQLR ATTMAMIFQE PMTALNPVVP VGRQIDEVLR
VHTDLDARAR KKRILAMMEQ VRLPDVERIF RAFPHRLSGG QRQRIMIAMA LVLEPKLLIA
DEPTTALDVT TQKQILTLIR DLQKDHGTAV LFITHDMGVV AEIADRVAVM RHGRLVETGT
LDQVLRAPAM EYTRKLLSAV PSLVPRPPRP ESFAPVVLEA SELGKVYRER AMFGRAREVV
AAQDVWLTLR KGRTLGIVGE SGSGKSTVAR CIVRLIDPTS GGVRLVGREI SNLSRRLLQP
HRQKIQIVFQ DPYRSLNPRI SIGESIAEGS INYGMSHKDA LAKARELLQL VDLPADAISR
FPHQFSGGQR QRIAIARALA LDPDVLVADE AVSALDVSVQ AQVLELLADI QTRLGIALLF
ITHDLRVAAQ ICDDVAVMQQ GRIVEQGPAG EILTHPRQAY TRQLLDAAPG RGWDFANFRP
VEAPIADARV GL