Gene RPC_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1182 
Symbol 
ID3969137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1287313 
End bp1288296 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID637924293 
Producthypothetical protein 
Protein accessionYP_531064 
Protein GI90422694 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTCC GCCGCCGGCT CGATCAGGTC GAGGCGGACC GAACTTCGCC CCGTGTGCTG 
TTTGCGCCTG TCGCGCCGGC GCGATCGGTC GAGGCGATTG TCGCGCAGGT CATCGATCTG
CTGGCCGAGA CCGTGCAACG GCTGTGGCCG CTGTGGTTCA CCGATGTCAG TTTCGCGGAA
TGTCGCAACG ATAAGCTCGG ACAGCTCGCC GCCACCGCGG TGGTTCGGCG TGTCGCCGGC
GATATTCCGG GGCTTTCGCC GAGCTGGGCC GAGGCGGCGG TCGAACTCGC GCTCGCGGAT
CGCCCGCCGC GCGTCAGGGC GGCGCTGCCG GCGGTCGAAT TGGCACAGCT CGCGCTCGCG
ATCAGCCGTC ATGGTCTGGT GTTGGTTGTC GACGGCGACG AGGCCTGCCA GCGATCCAGC
CCCGCCGCAG TCGTGTATGC GCTGGAGTGG ATCGCCCAGC ATGCCGATTG CGCCGTGGTC
GCGCTGTTCT CACAATTGCC GGCACGCGAG CCGCCGTTCG ACCGTATTCT CTATGGCGCG
CGGACGTTGC TTGCCGAGCA GATCGAGCCC GAAGCCGAGG CGCCCCGAGC CGAGGCTTGC
GCCGAGTCCG AGATTTGGCT CGCGCCGTGG CTGGGTTCGC CGCATCCGCT CAGCGAAGCC
GAGCAGCGGC TCGCAAAGGC ACTGCGTACC GATGCTGAAC TTGGATCGTT ATTTGGCTGC
AATCAGTTCG TGGATACCGT TCGAGGCTCG CGCCCGAAAG TGGATTTCGT CTGGCAGCAC
GGTCGTCTCG CCGTCGAACT CGACGGCTAT GGCAGTCACG GCAATCGGGC AGCTTTCATG
TACGATCGTC ATCGCGACTA CGAGTTGACG CTCAGCGGCT ACACTGTCTT GCGTCTGGCC
AATGATGAAA TCGCGCAGGA CATCGGAAAA GCGATTGAGA AGATCCGCGA CATCGTCCAC
CTTTGTCGCG ATCGGATGAA ATGA
 
Protein sequence
MALRRRLDQV EADRTSPRVL FAPVAPARSV EAIVAQVIDL LAETVQRLWP LWFTDVSFAE 
CRNDKLGQLA ATAVVRRVAG DIPGLSPSWA EAAVELALAD RPPRVRAALP AVELAQLALA
ISRHGLVLVV DGDEACQRSS PAAVVYALEW IAQHADCAVV ALFSQLPARE PPFDRILYGA
RTLLAEQIEP EAEAPRAEAC AESEIWLAPW LGSPHPLSEA EQRLAKALRT DAELGSLFGC
NQFVDTVRGS RPKVDFVWQH GRLAVELDGY GSHGNRAAFM YDRHRDYELT LSGYTVLRLA
NDEIAQDIGK AIEKIRDIVH LCRDRMK