Gene RPC_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1140 
Symbol 
ID3969535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1239919 
End bp1240740 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID637924250 
Productenoyl-(acyl carrier protein) reductase 
Protein accessionYP_531022 
Protein GI90422652 
COG category[I] Lipid transport and metabolism 
COG ID[COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.257606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT TTACGGGCTT GATGCAGGGC AAGCGTGGCG TGGTGCTCGG CGTGGCCAAT 
AATCGTTCGA TCGCCTGGGG AATTGCCAAG GCCTGTCGCG CCCAGGGCGC GGAGATCGCG
CTGACCTGGC AGGGCGACGC GCTGAAGAAG CGGGTCGAGC CGCTCGCCGC CGAATTGGGC
GGCATCCTGC TCGGGCATTG CGACGTCACC GATCCGTCGA CCATCGACGC GGTGTTCGAC
GTGCTGAAAG AGAAATGGGG CAAGATCGAC TTCGTGGTGC ACGCCATCGC GTTCGCCGAC
AAGGACGAGC TGGTCGGCCG CTATGTCGAC ACCAGCGCCG ACAATTTCTC CAAGTCGATG
CTGATCTCCT GCTACTCGCT GACCGCGATC GCGCAGCGCG CCGAAAAGCT GATGACCGAC
GGCGGCTCGA TCCTGACGCT GACCTATTAC GGCGCCGAAA AGTGGATGCC GCATTACAAC
GTGATGGGTG TCGCCAAGGC GGCGCTGGAG GCCAGCGTGC GCTATCTCGC CGCCGACCTC
GGCGAAAAGA ACATCCGGGT CAACGCGATT TCGGCCGGGC CGATCAAAAC GCTGGCGGCC
TCGGGGATCG GCGACTTCCG CTACATTCTG AAGTGGAACG AGTACAATTC GCCGATGCGC
CGCACCGTCA CCATCGACGA GGTCGGCGAC AGCGCGGTGT ATCTGTTGTC GGGGATGTCG
CGCGGCGTCA CCGGCGAGGT GCACCACGTC GATTGCGGTT ACCACGTGGT CGGCATGAAG
CGCCCCGACG CGCCGGATAT TTCGCTGGCG AGCAAGGACT GA
 
Protein sequence
MADFTGLMQG KRGVVLGVAN NRSIAWGIAK ACRAQGAEIA LTWQGDALKK RVEPLAAELG 
GILLGHCDVT DPSTIDAVFD VLKEKWGKID FVVHAIAFAD KDELVGRYVD TSADNFSKSM
LISCYSLTAI AQRAEKLMTD GGSILTLTYY GAEKWMPHYN VMGVAKAALE ASVRYLAADL
GEKNIRVNAI SAGPIKTLAA SGIGDFRYIL KWNEYNSPMR RTVTIDEVGD SAVYLLSGMS
RGVTGEVHHV DCGYHVVGMK RPDAPDISLA SKD