| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1136 |
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| Symbol | |
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| ID | 3969531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1236691 |
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| End bp | 1237332 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924247 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_531019 |
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| Protein GI | 90422649 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.356422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATG CAACCTCCAT CAAACACCCA AGCGGGTTAA CGTCCGGTGA TTTCACCGCC
GCCGAGGAGC CATTCGCGCT GTTCGCCGAA TGGTTTGCCG AGGCGTCGGG GTCGGAGCCG
AACGATCCCA ATGCGATGGC GCTGGCCACC GTCGACCCCG ACGGGCTGCC CGACGTCCGC
ATGGTGCTGA TGAAGGGCTA CGATTCCCAC GGTTTCGTGT TCTACAGCCA TATCGCCAGC
CAGAAGGGCC GCGAACTCGC CGCCAATCCC AAGGCGGCGC TACTGTTTCA CTGGAAATCG
CTGCGCCGCC AGGTGCGGGT GCGCGGGGCC GTGACGCCGG TCAGCGACGC CGAGGCCGAC
GCCTATTTCG CCACCAGGTC GAAGCAATCG CAGATCGGCG CCTGGGCCAG CAAGCAATCG
CAACCGTTGG AAAGCCGCTT CGCCTTCGAA CAGGCGATCG CCGGCGTCGC CGCCAAGCAT
CTGATCGGCG CGGTGCCGCG GCCGCCGGGC TGGAGCGGCT GGCGGGTCAC CCCGGCGCGC
TTCGAGTTCT GGCACGACCG GCCGTTCCGG CTGCACGACC GCATCGAATT TCGCCGGGAC
ACCCCGGACC ATCCCTGGAC CAAGACAAGG CTGTACCCAT GA
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| Protein sequence | MSDATSIKHP SGLTSGDFTA AEEPFALFAE WFAEASGSEP NDPNAMALAT VDPDGLPDVR
MVLMKGYDSH GFVFYSHIAS QKGRELAANP KAALLFHWKS LRRQVRVRGA VTPVSDAEAD
AYFATRSKQS QIGAWASKQS QPLESRFAFE QAIAGVAAKH LIGAVPRPPG WSGWRVTPAR
FEFWHDRPFR LHDRIEFRRD TPDHPWTKTR LYP
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