| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1072 |
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| Symbol | |
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| ID | 3969584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1174092 |
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| End bp | 1175459 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924183 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_530955 |
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| Protein GI | 90422585 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase
[TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGTA CCGTCACCGA ATCGTTGATT TTCCGCGACA TGTTCGGCAC CGCCGCGATG
CGGTCGGTGT TCTCGGACGA GGCGCTGGTG CGCCGCTATC TCGAGGTCGA GGTAGCTCTG
GCCCGCGCTG AAGCCGCCAG CGGCGTGGTC CCGGCCGATG CCGCGGAGGC CATCGCGGCG
GCCGCCGCCA CCATGACCAT CGATTTCGAT CGGCTGCGCG ACCAGACCGA AATCACCGGC
TATCCGATTC TGGCGATCGT GCATCAATTG TCGGAAGCGG CGGGCGAAGC CGGCGGCTTC
GTGCATTGGG GCGCCACCAC CCAGGACATC ATGGACACCG CGACCGTGCT ACAGGTGCGC
GCCGCGCTCG ACCTGGTGGG CGCCGATCTC GTAGCGCTCC GCGACATTCT TGCGGCGCTG
GCGTTGAAGC ATCGCGACAC CCCGATGGCC GGCCGCACCC ATCTGCAGCA GGCGCTGCCG
ATCACCTTCG GCTACAAGGT CGCGGTCTGG CTATCGATGA TCGAACGTCA CATCGAGCGG
CTCGCGCAGA TGCGGCCGCG GGTGCTGCTC GGGCAATTCG CCGGCGCCGC CGGCACGCTC
GCCTCGCTCG GCGCCGACGG GCTTAAAGTG CAAGCCGCGC TGTGCGACCT GTTGGGGCTG
GCGCAGCCGT CGGCGACCTG GCATGTTGCG CGCGACGGCC TCGCCGAAGT AGTGTCGTTC
CTCGGGCTGG TCACCGGCAG CCTCGGCAAG ATCGGCACCG ACGTGATGTT GCTGATGGCG
ACCGAATTCG CCGAACTGGC GGAGCCGTTC GTCAAGGGCC GCGGCGCCTC CTCGACCATG
CCGCAGAAGC GCAACCCGAT TTCCTCCGAA CTGATGCTCG CCGCGGCGAA GACCGTTCGT
CAGCACGTAG CATTGATGCT CGACGGCATG GTGCAGGATC TGGAGCGCGC CACCGGCCCC
TGGCATGTCG AGTGGATCGC GATACCCGAG AGCTTCATCC TGACCGGCGG CGCGCTGGCG
CAAGCCAAGT ACATGCTGGA TGGGCTGATC GTCGATGCCG AGCGGATGCG CCACAATCTC
GCGATGAGCG GCGGTCTGAT CGTCGCCGAA GCGGTGATGA TGGCTGCGGC GCCGAAGCTC
GGCCGCCAGG TTGCGCACGA CGTGGTCTAT GACGCATGCC GCGTCGCGCT GACCGAAAAG
CGGACGCTGG CCGACGTGCT GATCGACGTG CCGGAGATCG TCGATGCGCT CGGCGACGCC
GAGGCGATCC GCCATCATTG CGATCCGGCG AACTATCTCG GCCTCGCGCC GCAGATGGTC
GATCGCATGC TGAGCCTGCT GCCGGCCGGC CAGGCGGGGG CGCGCTGA
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| Protein sequence | MPSTVTESLI FRDMFGTAAM RSVFSDEALV RRYLEVEVAL ARAEAASGVV PADAAEAIAA
AAATMTIDFD RLRDQTEITG YPILAIVHQL SEAAGEAGGF VHWGATTQDI MDTATVLQVR
AALDLVGADL VALRDILAAL ALKHRDTPMA GRTHLQQALP ITFGYKVAVW LSMIERHIER
LAQMRPRVLL GQFAGAAGTL ASLGADGLKV QAALCDLLGL AQPSATWHVA RDGLAEVVSF
LGLVTGSLGK IGTDVMLLMA TEFAELAEPF VKGRGASSTM PQKRNPISSE LMLAAAKTVR
QHVALMLDGM VQDLERATGP WHVEWIAIPE SFILTGGALA QAKYMLDGLI VDAERMRHNL
AMSGGLIVAE AVMMAAAPKL GRQVAHDVVY DACRVALTEK RTLADVLIDV PEIVDALGDA
EAIRHHCDPA NYLGLAPQMV DRMLSLLPAG QAGAR
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