| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1060 |
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| Symbol | |
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| ID | 3969631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1165529 |
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| End bp | 1166413 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924171 |
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| Product | malonate decarboxylase gamma subunit |
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| Protein accession | YP_530943 |
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| Protein GI | 90422573 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0857455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACACCC TATTAGGAAA AGGCCGGGAG GCGGTCGATC TGATCGTCGA TCCGAAGAGC
TTCGTGCAGG ACAAGGTCGG CAAGCTGGCG TTCAGCGATC CGACCTTCGG GCCCGGCGCG
GTGGTGGGCG AAGCCAAGCT CGATGGCGCG CTGGTCACGG TGATCGCCTC GGACGCGGAA
GCCTTCAACG AGAAATTTCC GGTGGTGTAT TCCGGCATCA TCGGCATGGA GGAGGGCTAC
AAGATGGCGC AGGCCGTCTA CGCCAGCCTC GCGGCCGATG CCGAGCTGCC GTTGGCGAAG
AAGCGGGCGC TCGTGCTGAT CGTCGACACT CCCGGCAACG GTCCGGGCAA GGTCGAAGAG
ATTTTCGGCA TGAACAAGGC GACCGGTGCC TATCAGCTGG CATTGGCGGA AGCCCGGCTT
GCCGGACATC CGATCGTCGC CATGGTGGTC GGTCGCGCGA TTTCCGGCGC CTTCCTGTGC
CACGGATTGC AGGCCGATCG GATTCTGGCG TTGGACTCCA AGTTCGGCAC CATGATCCAC
GTGATGCCGA TCACCTCGGT GTCGCGGATC ATCAAGAAGG ACATCGAAGT GCTCGAGGAA
TTGGCCAAGA GCAACCCGGT GTTCGCGGCC GGTCCGGCGT TCTTCTATCA GCTCGGCGGT
GTCGAGGAGT TGGTCTCCGA AATTCCGGCG ATGCGTCCGG CGATCATCAA GCAGGTCGCC
GAAATCCGTA AGGCGAAGGC CGCCGGCCTC AACCTCGTCG GCCCGCGTGG CCGCGGCAAG
CTCGGCCTGG ATCGCGGCGG CCGCAAGGTC CGTCCGTTGG TGCAGGAACG GCTGAGCAAC
GAGTTCGCGG CGGTGCAAGC CAAATTCCGC CCGCAAGCGA ACTAA
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| Protein sequence | MDTLLGKGRE AVDLIVDPKS FVQDKVGKLA FSDPTFGPGA VVGEAKLDGA LVTVIASDAE
AFNEKFPVVY SGIIGMEEGY KMAQAVYASL AADAELPLAK KRALVLIVDT PGNGPGKVEE
IFGMNKATGA YQLALAEARL AGHPIVAMVV GRAISGAFLC HGLQADRILA LDSKFGTMIH
VMPITSVSRI IKKDIEVLEE LAKSNPVFAA GPAFFYQLGG VEELVSEIPA MRPAIIKQVA
EIRKAKAAGL NLVGPRGRGK LGLDRGGRKV RPLVQERLSN EFAAVQAKFR PQAN
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