| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1047 |
|---|
| Symbol | |
|---|
| ID | 3969618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1148930 |
|---|
| End bp | 1150285 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924158 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_530930 |
|---|
| Protein GI | 90422560 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACCG ATAACGAAAA CGCAACAACA CGCGGCCTCT CGCCGGCGGC CATGCGGAAA
GTGGTCGCCG CGAGTTTCGC CGGCGCCCTG CTCGAATGGT ATGATTTCTT CATCTTTGGG
ACCGCGGCGG GCCTCGTGTT CGGCAAGCTG TTCTTCCCGC AGTCGGATCC TGCGGTGGGG
ACGATCGCGG CGTTTGCCAC CTTCGGTGTG GGCTTTCTCG CCCGGCCACT CGGCGGCGTG
GTGTTCGGTC ATTTCGGAGA CCGGGTCGGG CGCAAGGCGA CCTTGATCGC GACGCTGTTG
ATCACCGGCA TATCGACTTT CCTCATCGGG TTTCTGCCGA CGTTCGCCGA TGTCGGGATC
GCGGCGCCCA TCATGTTGGT GGTGCTTCGG CTGATTCAGG GGTTTGGATT GGGCGGCGAG
TACGGCGGCG CAGCCCTGAT GACGATCGAA TCCGCGCCGG AATCGCGTCG TGGTTTCTTC
GGCTCCTTGC CGCAAATGGC GGCGTCCGCC GGAATCATGT TGGCGACGGG CGTGTTCGCC
TTGTGCAGTT GGGGGCTTAC GGAAGCGCAG TTCTTGGATT GGGGCTGGCG CCTTCCCTTC
CTGCTTTCGG CGGCAATGCT GATCGTGGGC ATGCAGATCC GGCTACACAT CGAGGAGACA
CTGGATTTCA AGGCCACGCG ACGCCGCGAG CAGGCTAGCA CCGAGAAGCG AGTGCTCCCG
ATCGTCGAAC TGCTACGCCG GCATCCCCGC AATATCGCGC TCGCGCTCGG CGCGCGCCTC
GCCGAGACGG TGTCCTCGAA CATCGTCAAT GCATTCGGCA TTGCCTACGT CTCCACCAAC
CTGGCGATGG GGCGTCAGCT TCCGCTGATG GGCATGCTGA TGGCTTCGGC GATCGGCATC
ATGCTGTGCC CGCTGTTTGG CTGGCTCTCC GATCGGTACG GCCAACGCGT GGTCTACCTG
TTCGGCGCAC TGGCCTGCGC GGTTCTGATC GTGCCGTTCT TCGCGGCGCT CGCAACCGGA
AATGGCGTGC TGATCTGCCT CGCCTTCATT GTCTTTTACA ATTTGGGTCC CACGGCGATG
TTCGCGGTGC AGCCCACGAT GTTCTCGCGG ATGTTCGGCA CCAGGGTTCG CTACACCGGC
CTGTCGTTCG CCTATCAGTT CTCGGCGATG CTCGGCGGCC TCACGCCGCT GATTTCGGCG
TCGCTGCTGA CGCTCGGCCA TGGCGACCCG TGGTGGGTGG CAGGCTATCT GATCGTCGTC
TCGTTGATCT CCGCGACGTC GGTCTGGCTG ATCAGCGAGG TTCGGCTGAT TGAACTTCAT
GACTATGCGA CGGCACTGCC GCGGGAGACG ACATGA
|
|---|
| Protein sequence | MPTDNENATT RGLSPAAMRK VVAASFAGAL LEWYDFFIFG TAAGLVFGKL FFPQSDPAVG
TIAAFATFGV GFLARPLGGV VFGHFGDRVG RKATLIATLL ITGISTFLIG FLPTFADVGI
AAPIMLVVLR LIQGFGLGGE YGGAALMTIE SAPESRRGFF GSLPQMAASA GIMLATGVFA
LCSWGLTEAQ FLDWGWRLPF LLSAAMLIVG MQIRLHIEET LDFKATRRRE QASTEKRVLP
IVELLRRHPR NIALALGARL AETVSSNIVN AFGIAYVSTN LAMGRQLPLM GMLMASAIGI
MLCPLFGWLS DRYGQRVVYL FGALACAVLI VPFFAALATG NGVLICLAFI VFYNLGPTAM
FAVQPTMFSR MFGTRVRYTG LSFAYQFSAM LGGLTPLISA SLLTLGHGDP WWVAGYLIVV
SLISATSVWL ISEVRLIELH DYATALPRET T
|
|---|
| |