Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1039 |
Symbol | |
ID | 3969649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1140500 |
End bp | 1142050 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637924150 |
Product | filamentation induced by cAMP protein Fic |
Protein accession | YP_530922 |
Protein GI | 90422552 |
COG category | [S] Function unknown |
COG ID | [COG3177] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGG CCTTAGCCAC CCCGCACCTC TTCCAGGACA AGCTCCTGCC GGATGAGGCA AGGCCTGTGG GCTTGTCGGC TCTGGTGCAT GCGCTGGCCG TCAAGGCTCC GGTGCGCCGC CCGTGCGCGA TTTCCGAAAA GCACATTCGC GGCAGTTCTC GCGATCAAGC CGAATGGCGG CTTTTCGACA AGCGCTATTG GCCGGGCGAA ACCCTTTCCG CCCACCTGAA CTTTGCCCTC CGCCATGAGG ATCTGGATCT GCTCGTCCTA AAACGGGTGT TCAAGGCGGT GCCGAAATCG GCAATCGAAG CATTCGTCCG CGAAGCGCCG ACCGGCGTGC CGACGCGCCG CGTCTGGTTT CTATACGAGA CGCTGACGGG AGAAATGCTA GACGTTGCGG AATCCCCGGC TATAGCGGCG GTCGATTTGC TCGACCCCAA AGCCTACTTC ACGGGCAAGC CGAAAGTCTC CAAGAGGCAC CGTGTCCGGG ACAATCTGCT CGGAACGAAG GACTTTATTC CGATCATCCG CCGCACACCT GCACTTGCCG CATTCACCGA AAGCGGCCTT GCGGCCAAAG CGCGTGACAC CGTCGGCCGC ACCGGCGGGC ACGTCGTTGC CCGCGCCGCC AGCTTTCTTC TACTGGCGGA CAGCCGCGCG AGTTTTGAGA TCGAGGGCGA ACACCCGCCG CGCAACAGGC TTGAGCGCTG GGGACGTGCG GTCGTCCAGG CCGGGAAACA TGCGCTTACG CTGGATGAGA TCAACCGGCT TCACGGCGTC CTGATCGAAG ACAACCGGCT TATCCGCCCC GGTCTTCGCC CTGACGGCGT TTTTGTCGGC GAACGGGATC ACGAGAACAA TCCGATGCCG GAATTCATCG GCGCGCGGCC CGATGATCTC GACAGCTTGA TGAAGGGCAT GATCGCCACC AACACGCGGA TGCGGGATGA CGGCATGGAT GCGGTCCTGC AAGCGGCATG CACGGCCTTC GGATTTGTCT ATGTCCATCC CTTCCAGGAC GGCAACGGGC GTCTTCACCG CTGCCTGATC CACCACGTCC TTGCAGAGCG CAAATTCACG CCACCCGGCA TGGTGTTTCC GGTCTCGTCC GTCATGCTGG ACCGGATCGA CGATTACCGC ACGACATTAC AGGCGCATTC GGGTCCGCTC ATGGATTACA TTGAGTGGAA AGCGACACCC GACCGCAACG TCGATGTGAC AAACGACACA GCCGACCTGT ACCGATATTT CGACTGTACG GAAGAAGCCG AATTTCTCTA TCAGTGCGTC GCGCACACCA TTGAGCATGA TCTGCCGCAT GAAATTGATT ATCTGCGCCG CCACGACGAA GCGCGCCGCA AGATCATGGA CACGGTCGAG ATGCCCGACC GTCTCGCCGA CGACCTGCTG CTGTTCATCC GCCAAAACAA AGGAACGCTC TCGAAGAAGC GCAGAGAGCG TGAATTCAAG GCATTGAAGG ACGAAGAAAT CGCACAGATC GAAGATGTCG TGCGCGAGGC ATTCGACGGG TTCGAGAATC GTGTCCCCTG A
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Protein sequence | MDLALATPHL FQDKLLPDEA RPVGLSALVH ALAVKAPVRR PCAISEKHIR GSSRDQAEWR LFDKRYWPGE TLSAHLNFAL RHEDLDLLVL KRVFKAVPKS AIEAFVREAP TGVPTRRVWF LYETLTGEML DVAESPAIAA VDLLDPKAYF TGKPKVSKRH RVRDNLLGTK DFIPIIRRTP ALAAFTESGL AAKARDTVGR TGGHVVARAA SFLLLADSRA SFEIEGEHPP RNRLERWGRA VVQAGKHALT LDEINRLHGV LIEDNRLIRP GLRPDGVFVG ERDHENNPMP EFIGARPDDL DSLMKGMIAT NTRMRDDGMD AVLQAACTAF GFVYVHPFQD GNGRLHRCLI HHVLAERKFT PPGMVFPVSS VMLDRIDDYR TTLQAHSGPL MDYIEWKATP DRNVDVTNDT ADLYRYFDCT EEAEFLYQCV AHTIEHDLPH EIDYLRRHDE ARRKIMDTVE MPDRLADDLL LFIRQNKGTL SKKRREREFK ALKDEEIAQI EDVVREAFDG FENRVP
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