Gene RPC_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1039 
Symbol 
ID3969649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1140500 
End bp1142050 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content60% 
IMG OID637924150 
Productfilamentation induced by cAMP protein Fic 
Protein accessionYP_530922 
Protein GI90422552 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGG CCTTAGCCAC CCCGCACCTC TTCCAGGACA AGCTCCTGCC GGATGAGGCA 
AGGCCTGTGG GCTTGTCGGC TCTGGTGCAT GCGCTGGCCG TCAAGGCTCC GGTGCGCCGC
CCGTGCGCGA TTTCCGAAAA GCACATTCGC GGCAGTTCTC GCGATCAAGC CGAATGGCGG
CTTTTCGACA AGCGCTATTG GCCGGGCGAA ACCCTTTCCG CCCACCTGAA CTTTGCCCTC
CGCCATGAGG ATCTGGATCT GCTCGTCCTA AAACGGGTGT TCAAGGCGGT GCCGAAATCG
GCAATCGAAG CATTCGTCCG CGAAGCGCCG ACCGGCGTGC CGACGCGCCG CGTCTGGTTT
CTATACGAGA CGCTGACGGG AGAAATGCTA GACGTTGCGG AATCCCCGGC TATAGCGGCG
GTCGATTTGC TCGACCCCAA AGCCTACTTC ACGGGCAAGC CGAAAGTCTC CAAGAGGCAC
CGTGTCCGGG ACAATCTGCT CGGAACGAAG GACTTTATTC CGATCATCCG CCGCACACCT
GCACTTGCCG CATTCACCGA AAGCGGCCTT GCGGCCAAAG CGCGTGACAC CGTCGGCCGC
ACCGGCGGGC ACGTCGTTGC CCGCGCCGCC AGCTTTCTTC TACTGGCGGA CAGCCGCGCG
AGTTTTGAGA TCGAGGGCGA ACACCCGCCG CGCAACAGGC TTGAGCGCTG GGGACGTGCG
GTCGTCCAGG CCGGGAAACA TGCGCTTACG CTGGATGAGA TCAACCGGCT TCACGGCGTC
CTGATCGAAG ACAACCGGCT TATCCGCCCC GGTCTTCGCC CTGACGGCGT TTTTGTCGGC
GAACGGGATC ACGAGAACAA TCCGATGCCG GAATTCATCG GCGCGCGGCC CGATGATCTC
GACAGCTTGA TGAAGGGCAT GATCGCCACC AACACGCGGA TGCGGGATGA CGGCATGGAT
GCGGTCCTGC AAGCGGCATG CACGGCCTTC GGATTTGTCT ATGTCCATCC CTTCCAGGAC
GGCAACGGGC GTCTTCACCG CTGCCTGATC CACCACGTCC TTGCAGAGCG CAAATTCACG
CCACCCGGCA TGGTGTTTCC GGTCTCGTCC GTCATGCTGG ACCGGATCGA CGATTACCGC
ACGACATTAC AGGCGCATTC GGGTCCGCTC ATGGATTACA TTGAGTGGAA AGCGACACCC
GACCGCAACG TCGATGTGAC AAACGACACA GCCGACCTGT ACCGATATTT CGACTGTACG
GAAGAAGCCG AATTTCTCTA TCAGTGCGTC GCGCACACCA TTGAGCATGA TCTGCCGCAT
GAAATTGATT ATCTGCGCCG CCACGACGAA GCGCGCCGCA AGATCATGGA CACGGTCGAG
ATGCCCGACC GTCTCGCCGA CGACCTGCTG CTGTTCATCC GCCAAAACAA AGGAACGCTC
TCGAAGAAGC GCAGAGAGCG TGAATTCAAG GCATTGAAGG ACGAAGAAAT CGCACAGATC
GAAGATGTCG TGCGCGAGGC ATTCGACGGG TTCGAGAATC GTGTCCCCTG A
 
Protein sequence
MDLALATPHL FQDKLLPDEA RPVGLSALVH ALAVKAPVRR PCAISEKHIR GSSRDQAEWR 
LFDKRYWPGE TLSAHLNFAL RHEDLDLLVL KRVFKAVPKS AIEAFVREAP TGVPTRRVWF
LYETLTGEML DVAESPAIAA VDLLDPKAYF TGKPKVSKRH RVRDNLLGTK DFIPIIRRTP
ALAAFTESGL AAKARDTVGR TGGHVVARAA SFLLLADSRA SFEIEGEHPP RNRLERWGRA
VVQAGKHALT LDEINRLHGV LIEDNRLIRP GLRPDGVFVG ERDHENNPMP EFIGARPDDL
DSLMKGMIAT NTRMRDDGMD AVLQAACTAF GFVYVHPFQD GNGRLHRCLI HHVLAERKFT
PPGMVFPVSS VMLDRIDDYR TTLQAHSGPL MDYIEWKATP DRNVDVTNDT ADLYRYFDCT
EEAEFLYQCV AHTIEHDLPH EIDYLRRHDE ARRKIMDTVE MPDRLADDLL LFIRQNKGTL
SKKRREREFK ALKDEEIAQI EDVVREAFDG FENRVP