| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0991 |
|---|
| Symbol | |
|---|
| ID | 3969678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1084761 |
|---|
| End bp | 1085222 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637924108 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530880 |
|---|
| Protein GI | 90422510 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00605298 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000521663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTA TTCGCGTAGT TCAGCTTCAG GATCTTAAAC CCGCTCCACC GCTTCATCGG
CCGTGGACGA AGAACCGGCG CGTCGGCGAC ATCGTCGCGC CGATCGATGC CACGCTGGCG
CAGACCCAGC GCGTCAGCTT CAATCCGGTG ATCCCCGCGC CGATCACTGC GGCGACTGCG
CCAACCAGAA GCGCCGCTTT TTCTTCAACC GACGGTGCAG AGGCTCTTCG ACTGGCGGTG
CAGACGCCGA ACGACTCGCA CCGCTTCGAT CACGCCCCCG AACTCCCCAC CCTTTTCTTC
CTCCGGCGAG TGCTGTTGGA GCGCTGGAAA GGTAACTGGC TGATCGGCAT CACTTGGATC
GGCAACGACG AGATGGACCT TCTGGTGACC AACCACAAGG CCATCGGGAG CGGCGATTGG
GCCATTTTCG CCATGGTTTC GAGCGATGCC ACCGGCGGTT AA
|
|---|
| Protein sequence | MAGIRVVQLQ DLKPAPPLHR PWTKNRRVGD IVAPIDATLA QTQRVSFNPV IPAPITAATA
PTRSAAFSST DGAEALRLAV QTPNDSHRFD HAPELPTLFF LRRVLLERWK GNWLIGITWI
GNDEMDLLVT NHKAIGSGDW AIFAMVSSDA TGG
|
|---|
| |