Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0954 |
Symbol | |
ID | 3969717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1048856 |
End bp | 1049494 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637924070 |
Product | periplasmic nitrate reductase c-type cytochrome, NapC/NirT |
Protein accession | YP_530843 |
Protein GI | 90422473 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02161] periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.448088 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA TCGACCCTTC GGCGCCGCGC CGCTCATGGC TGGCGCGGGC CTGGCAGTTT CTGAAAGATC TGTGGCAGGT GCTGCTGCGG CCGAGTTCGG TGTTCGGGCT CGGCGTGCTG GTGCTGGCGG GATTCGTCGC CGGCATCGTG TTCTGGGGCG GCTTCAACAC CGTGCTGGAA GCCACCAACA CCGAGAAATT CTGCACCGGC TGCCACGAGA TGCGCGACAA CGTATTCGCC GAATTGAAGC CGACCATCCA CTTCTCGAAC CGCTCCGGCG TCCGCGCCAG CTGCCCGGAT TGCCACGTGC CGCACAATTG GACCGACAAG ATCGCCCGCA AGATGCAGGC CTCGAAAGAG GTCTGGGGCC ATCTGTTCGG CTCGATCGAC ACCCCGGACA AATTCCGCGA GAACCGGCTG GAGCTGGCGA TGCACGAATG GTCGCGCTTC AAGGCCAATG ATTCGCTGGA ATGCCGTAAC TGCCATAGCG CAGCCTCGAT GGACATCACC AAGCAGTCGC CGCGCGCTTC GGTGGCGCAT CAGCGCTATC TGTTCACCGG GGAAAAGACC TGCATCGATT GCCATAAGGG CATCGCCCAC CATCTGCCCG ACATGCGCGG GGTGCCCGGC TGGCAATAA
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Protein sequence | MTAIDPSAPR RSWLARAWQF LKDLWQVLLR PSSVFGLGVL VLAGFVAGIV FWGGFNTVLE ATNTEKFCTG CHEMRDNVFA ELKPTIHFSN RSGVRASCPD CHVPHNWTDK IARKMQASKE VWGHLFGSID TPDKFRENRL ELAMHEWSRF KANDSLECRN CHSAASMDIT KQSPRASVAH QRYLFTGEKT CIDCHKGIAH HLPDMRGVPG WQ
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