| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0918 |
|---|
| Symbol | |
|---|
| ID | 3969759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1016988 |
|---|
| End bp | 1017653 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924034 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_530807 |
|---|
| Protein GI | 90422437 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGA CCGGTCCTGG CGTCGTCGGG GTCGACTCGG AGGAATTCTT CGGCCGCGCC
CGGCAACGGT TGGGTTTCGA GGTTCCGCCC GCTCTCACCG ACCCTAGCAT CTTGCCCCCC
AGCGGCGATG CCGGAACCGA CCGGATGTGG CAGATCATCG CGCAGGAGCG GCCGGTCCGT
CCTGCGGCCG TGCTGATCGC CGTGGTCGAC CACGCCGAGC CGACCGTGCT GTTGACGATG
CGCGCGGCAC ATCTCACCGA CCACGCCGGC CAGATCGCGT TTCCCGGCGG CAAGATCGAC
GCCGTCGACG CCTCGCCGCG CGACGCCGCG CTGCGCGAGG CCGAGGAGGA GATCGGGCTC
GACCGCAGCT ATGTCGATCC GATCGGCTAT CTCGATCTCT ACGCCACCGG CTACGGCTTT
CGCATCCTGC CGCTGGTGGC GCGGGTCAGG CCGGGCTTCG AGCTGCGCAT CAACAAGGCG
GAGGTCGACG ACGCCTTCGA GGTGCCGCTG GCGTTCCTGA TGAACCCGGC CAACCACCAG
CTGCACAGCA AGGAATTTCG CGGCGCCGCG CGCAGCTACT ACGCCATGCC GTTCGCCGAG
CGCTACATCT GGGGTGCCAC CGCGGGAATC TTGCGGGTGC TGTACGAGCG GGTTTATCTG
CCATGA
|
|---|
| Protein sequence | MLETGPGVVG VDSEEFFGRA RQRLGFEVPP ALTDPSILPP SGDAGTDRMW QIIAQERPVR
PAAVLIAVVD HAEPTVLLTM RAAHLTDHAG QIAFPGGKID AVDASPRDAA LREAEEEIGL
DRSYVDPIGY LDLYATGYGF RILPLVARVR PGFELRINKA EVDDAFEVPL AFLMNPANHQ
LHSKEFRGAA RSYYAMPFAE RYIWGATAGI LRVLYERVYL P
|
|---|
| |