| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0865 |
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| Symbol | |
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| ID | 3969823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 954542 |
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| End bp | 955225 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923981 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_530754 |
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| Protein GI | 90422384 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGTTCG CGCTCGATAT CTGGGCTCCG GTTGAAGTCG CGCCGGCGGT GATTGCGAAG
TCGACATCGG TTTCCTCGGC GCCGGCGGCA GCGTGCGAGC AGCAACTGCC GACGCCGCCG
TTGGACGAGG ACGAACAGCT TCTCAATCGG CTCGCCGAAC ATGACGAAGC GGCGTTTCGG
CTGTTGGTCG AGCGCCACAT CGATCGCGCA TTCGGCATCG CGCTGCGCAT CGTCGGCAAT
CGCGCCGATG CCGAAGACGT CGTGCAGGAT ACCATGCTCA AGGTGTGGAC GCATCGCGGG
CAGTGGCAGC ACGGCCGCGC CAAGTTCTCC ACCTGGCTGT ATCGCGTGGT CACCAACCGC
TGCATCGATC TGCACCGCCA GCCGCGCACC GACTGTGTCG ACGCGGTGCC GGAGCCGGCC
GATGGCCGGC CGGACGTGGT CAGCACCATG CAGCGCGACG AGGTTACGCA TCTGCTGGAG
AACGCGATGC GGCAGTTGCC CGAGCAGCAG CGCATCGCGG TGATTTTTTC GTACCACGAG
AACATGAGCA ACGGCGAAAT TGCCGAGGTG ATGGAGACCA CGGTGGCGGC GGTGGAGTCG
CTGCTGAAAC GCGGCCGTCA GCAGCTGCGC GATCTGCTGC GCCGGCACGA GCGCGACATC
CGCCACGTGT TTACCGAATA CTAA
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| Protein sequence | MAFALDIWAP VEVAPAVIAK STSVSSAPAA ACEQQLPTPP LDEDEQLLNR LAEHDEAAFR
LLVERHIDRA FGIALRIVGN RADAEDVVQD TMLKVWTHRG QWQHGRAKFS TWLYRVVTNR
CIDLHRQPRT DCVDAVPEPA DGRPDVVSTM QRDEVTHLLE NAMRQLPEQQ RIAVIFSYHE
NMSNGEIAEV METTVAAVES LLKRGRQQLR DLLRRHERDI RHVFTEY
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