Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0836 |
Symbol | |
ID | 3969833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 923002 |
End bp | 924174 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923952 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_530725 |
Protein GI | 90422355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0783302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCAGGA CAACACTCAT ATTGTCGAGC TTGTGCGCCA CCACGGCGCT GACCGCGCCG GCATTCGCGG CCGACCCGAT CAAGATCGGC GTGGTCACGC CGCTGTCCGG CACCTACACG CCGATCGGCC AGCAGGTGCG CTGGGGACTC GAACTTGCGG CCAGCGAAGT CAACGCCGCC GGCGGCATCA TGGGCCGTCC GGTGCAGCTG ATCTTCGAGG ACGAAGAAGC CAACCCCTCG GTCGCGGTGC AGAAGGCCGA GAAGCTGTTC GACGTGCAGA AGGTGGATTT CCTCACCGGC ACGGTGAATT CCGGCTCGAC GCTCGCGGTC GGACAGACCG CGGAGCGCGC CGGCAAGCTG ATCGCCACCA CGGTGTCGTT CGCGGATTCC ATCACCACCG ATAAATGTTC GCCGAACGTA TTCCGCGTCA ACGCCCGCGC CGGCCAGCAA TCCACCGCGC TCGCCGCCTG GGTGATCAAG CAGAAACCCA AAGCCAAAGT GTATTTCCTC GGCCCCGACT ACGAGATGGG CCGCTCGACG GTGGCGACCT TCAAGAAGAC CGTCGAGGCG CTCGGCGCCG TGCCGGCCGG CGAGGTGTTC GCGCCGCTCG ACAGCAAGGA CTTCACGCAA TATTTCGGGC AACTGCGCCA GGCGCGGCCG GAAGTGCTCT ACACCTCGGT CGCCGGCAAC GACACCGTGC GCCTCCTGAC TCAGATGCAG GATTTCGGAC TGCTGAAAGA CCTGCTGGTG GTCGGCGCGT CCGGCACGGT GACCTCGCAG AACATCGCCG CGATCGGCGG CGCCGCCGAG GGCTTCGGCA CCGGCGTCGG CTATTCGACG CAGATCGATA CGCTGGAGAA CAAGACCTTC GTCGCCGCGT TCAAGGCCGC CAACAAATCG GATCCTGATC TGTACGGCGC CGACAGCTAC GGCCTGATCT ATTTCTACAA GGCGGCGGTC GAAAAGGCGA AGTCCACCGA CACCGACAAG GTGCGCGAGG CGATGCGTGG CCTGGAGTGG AATACGCCGC AGGGCAAGAA GACCATGCGC GCCGGCGATC ACCAGGCGAT CCAGCCGATG TATGTGGTCC GCGTCAACGG CGGCCAGTTC AAGATCGTCG GCAATGTCTC AGGCGAGGAA GCCATCGGCC CCGACGAGTG CAAGCGGTTT TGA
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Protein sequence | MIRTTLILSS LCATTALTAP AFAADPIKIG VVTPLSGTYT PIGQQVRWGL ELAASEVNAA GGIMGRPVQL IFEDEEANPS VAVQKAEKLF DVQKVDFLTG TVNSGSTLAV GQTAERAGKL IATTVSFADS ITTDKCSPNV FRVNARAGQQ STALAAWVIK QKPKAKVYFL GPDYEMGRST VATFKKTVEA LGAVPAGEVF APLDSKDFTQ YFGQLRQARP EVLYTSVAGN DTVRLLTQMQ DFGLLKDLLV VGASGTVTSQ NIAAIGGAAE GFGTGVGYST QIDTLENKTF VAAFKAANKS DPDLYGADSY GLIYFYKAAV EKAKSTDTDK VREAMRGLEW NTPQGKKTMR AGDHQAIQPM YVVRVNGGQF KIVGNVSGEE AIGPDECKRF
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