| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0817 |
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| Symbol | |
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| ID | 3969851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 899470 |
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| End bp | 901368 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923933 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_530707 |
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| Protein GI | 90422337 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.75563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA ACCGCAACAC CATTCTTGCC GTCATTCTGT CGGGCCTCGT GCTGCTCGGC
TGGCAATATT TCTTCAACAT CCCGCAGATG GAGAAGCAGC GCGCCGCCGA GCTCGCCAGC
AAGAGCCAGG CGGTGAACCC GGCGCAACCG CAAGGCGCCC AGCCCGCCAC GCCGGCGGCC
CCGGGCGCCG CGATCCCGCA GCCCAACGCC GCAACCGCGC CGGCCGGCTC CGCGCCGAAC
GCCATCCAGC CCCAGGCCAA CACCCCGGTG GTCAGCCGCG AGGCCGCACT CGCCGCCTCA
CCGCGGGTCA AGATCGACAC CCCCCGGCTC AGCGGCAGCA TCGCGCTGAA GGGCGCCCGC
ATCGACGATA TCGCGCTGGT CCAGTTCCGC GAAACGGTCG ATCCGAAATC GCCGGCGATC
GAGCTGTTCT CGCCGTCGGG CTCGGCCAAT CCCTATTACG CGGAATTCGG CTGGGTCGCC
GCCGCCGGCA CCTCGGTGAA GATTCCCGAT CAGAACACCC AATGGGAGCA GGACGGCACC
GGCAGCCTGA CGCCGAACCA TCCGGTGACG CTGAAATACG ACAACGGCGA AGGCCTGACC
TTCCGCCGCA CCATTACGAT CGACGAGCGT TATCTGTTCA CCATGAAGGA CGAGGTGACC
AACGTCGGCA ACGCCCCGGT CACGCTGTAT CCGTTCGCGC TGATCTCCCG TCACGGCACT
CCGCACGTCG CCGGCTATTA CATTCTGCAT GAAGGTCTGG TCGGCTATCT CGGCGAGCAG
GGGCTGCAGG AATACGGCTA CAGCAAGATC GACGAGGCCA AGGCGGTCAA CTTCAAGGTC
ACCAACGGCT GGCTCGGCAT CACCGACAAA TATTGGGCCG CGGCGCTGTT GCCCGACACC
AGCGCGCAAT TGCAGGCGCG GTTCTCGTCG AACCTTGCCA ACAACGTGCG CACCTACCAG
ACCGACTATC TGCAGGACGC CCAGACCATC GCGATCGGCG GCACCGGCAC CGCCAATGCG
CGATTGTTCG CGGGCGCCAA GGAAGCCGGC ACGGTCGGCA TCAACTTCCC GGCGCTGGGG
CTCGGCGGCT ACAACAAGGA TCTCGGCCTC AACCACTTCG ATCTGTTGAT CGATTGGGGC
TGGTTCTACT TCATCACCAA GCCGATGTTC GTGGCGCTCG ACTTTTTCTT CCATCTGGTC
GGCAATTTCG GCATCGCCAT CCTGCTGGTG ACGGTGATCA TCAAGCTGTT GTTCCTGCCG
CTCGCCAACA AATCCTACGC CTCGATGGCC AAGATGAAGG CGATCCAGCC GCAGCTCGCG
GCCTTGAAGG AGCGTCATCC GGACGACAAG GCCAAGCAGC AGCAGGAGAT GATGGAGATC
TACCGCAAGG AGAAGATCAA CCCGGTCGCC GGTTGCCTTC CCGTGCTGCT GCAGATCCCG
GTGTTCTTCT CGCTCTACAA GGTGCTGTTC GTCACCATCG AAATGCGCCA CGCGCCGTTC
TACGGCTGGA TCCACGACCT TTCGGCGCCG GATCCGACCA ACCTGTTCAA CCTGTTCGGT
CTGCTGGCGT TCGATCCGAC CCATGTGCCG GTGATCGGGC ATTACCTGGT GCTCGGCGCC
TGGCCGATCG TGATGGGCAT CACGATGTGG GTGCAGATGA AGCTCAATCC GACCCCGCCG
GATCCGACCC AGCAGATGAT CTTCGCCTGG ATGCCGCTGA TCTTCACCTT CATGCTGGCC
TCGTTCCCGG CCGGTCTGGT GATCTACTGG GCCTGGAATA ACCTGCTCTC GGTGGTGCAG
CAGGGCTACA TCATGCGGCG CAACGGCGTG AAGGTCGAAC TGTTCGACAA TCTGAAAGCC
AGCTTCGCCC GCAAAAAGAA GAACGCCAAG GCGACCTGA
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| Protein sequence | MTDNRNTILA VILSGLVLLG WQYFFNIPQM EKQRAAELAS KSQAVNPAQP QGAQPATPAA
PGAAIPQPNA ATAPAGSAPN AIQPQANTPV VSREAALAAS PRVKIDTPRL SGSIALKGAR
IDDIALVQFR ETVDPKSPAI ELFSPSGSAN PYYAEFGWVA AAGTSVKIPD QNTQWEQDGT
GSLTPNHPVT LKYDNGEGLT FRRTITIDER YLFTMKDEVT NVGNAPVTLY PFALISRHGT
PHVAGYYILH EGLVGYLGEQ GLQEYGYSKI DEAKAVNFKV TNGWLGITDK YWAAALLPDT
SAQLQARFSS NLANNVRTYQ TDYLQDAQTI AIGGTGTANA RLFAGAKEAG TVGINFPALG
LGGYNKDLGL NHFDLLIDWG WFYFITKPMF VALDFFFHLV GNFGIAILLV TVIIKLLFLP
LANKSYASMA KMKAIQPQLA ALKERHPDDK AKQQQEMMEI YRKEKINPVA GCLPVLLQIP
VFFSLYKVLF VTIEMRHAPF YGWIHDLSAP DPTNLFNLFG LLAFDPTHVP VIGHYLVLGA
WPIVMGITMW VQMKLNPTPP DPTQQMIFAW MPLIFTFMLA SFPAGLVIYW AWNNLLSVVQ
QGYIMRRNGV KVELFDNLKA SFARKKKNAK AT
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