Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0805 |
Symbol | |
ID | 3969877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 889380 |
End bp | 889799 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637923921 |
Product | PilT protein-like |
Protein accession | YP_530695 |
Protein GI | 90422325 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.402403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTTC TCGACACCAA TGTGGTCTCC GAAGGTCTCC GGCCGAAGCC GAACCTCGGG GTCCGCGATT GGCTCGACAC CCAGCCGGCC GACGCGCTTT TTATTTGCGC GCCCGTGTTG GCTGAGATCC GCTTCGGCAT CGAACGGCTG GACGCCGGCG TGCAGCGTCA GACGCTGCTG GCGTGGGCTG CCCGACTGGA GAGCGAGACG TTCTTCGACC ACATCCTTCC ATTCGACGCT GCCGCGGCGA CAATCTATGG ACGGATCGCG GCGCAGCGCC AATCGGCGGG ACGGCCGATC GGCATCGTGG ACTGCATGAT CGCGGCGATT GCGCTCGCGC ACCAAGCCGC CGTCGCCACC CGCGACAGAT ATGGCTTTGA CGGCCTCGGC CTGACCGTTA TCAATCCGTT CGAAATTTGA
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Protein sequence | MIVLDTNVVS EGLRPKPNLG VRDWLDTQPA DALFICAPVL AEIRFGIERL DAGVQRQTLL AWAARLESET FFDHILPFDA AAATIYGRIA AQRQSAGRPI GIVDCMIAAI ALAHQAAVAT RDRYGFDGLG LTVINPFEI
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