Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0775 |
Symbol | |
ID | 3969942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 859909 |
End bp | 861264 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923890 |
Product | lytic murein transglycosylase |
Protein accession | YP_530665 |
Protein GI | 90422295 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.73463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGCAA TGAGCATCGG CACCACAGCA CGACTGACGG CGATCGCGGC GACGCTTTGC GGGACGCTCG GCGCGAATCC GGCGTCGGCA CAATCCTCGG GGCCGTTCAG CCTGTTCGAC AACATTTTCA CCGGCTCGAT CTCGCAAGGC AGCCACACCG CGCCGGTCTG GAGCGGCGAG GACGGCGCCT CGGGGCATCC CTTGATGACG GCGGCGGCGA TCCGCGAGGC GGCGTCGAAT TTCGACAATT GCGTTGCCTC GCTGTGGCCG GACGCGGCGC GCCGCGGCAT TTCGCAGGAC AGCTTCCAAC GCTTCACCGC CGGCCTCGAA CCCGACCTGC GGATCATGGA CCTGATGGAT TCGCAGCCGG AATTCACCAA GGCGATCTGG GACTATCTCG ACATCCTGGT GAACGACAAC CGGCTCGCCA AGGGCCGCGA GGTGCTGGCA AAGTACAAGC CGCAATTCGA CGCCGCGGAA CGCGCCTACG GCGTCGATCG CTACATCATC GCGGCGATCT GGGGCATCGA ATCCAACTAC TCGACCCAGA TGGGCGACCG CAGCGTGCTG CAATCCACCG CGACCTTGGC CTGCGTCGGC CGCCGGCAGA AATATTTCCG CGACGAGTTT CTGGTGACGC TGGAGATCCT GCATCGCGGC GACCTGCGTC CCGAGCAGAT GCGCGGCTCC TGGGCCGGCG CGTTCGGCCC GACGCAATTC ATGCCGACCG CGTTCAAGCG CTTTGCCGTC GACGCCGACG GCGATGGCCG CCGCGACGTC GTCGACAACC CCGCCGACCT GATCTTCTCC ACCGCCAACA ACCTGAAGAA AGACGGCTGG CAGAGCGGCG CCACCTGGGG CTACGAGGTG GTGCTGCCGC AGAACTTCAA TTTCATGCTG GCCGATCGCG GCAAGGCGGT GAGCATCGCG CAATGGCAGC AGCTCGGCCT CAAGCGTGCC AATAACCAGC CGTTCCCCAA CCCCGCCGAC AAGGCCTATG TGCTGGCGCC GGCCGGCGCC GACGGCCCGG GCTTTCTGAT GCTGCAGAAT TTCCGCGTCA TCATGAAATA CAACCCCGCC GAGGCCTACG CGCTGGCGAT CGGGCATTTC GCCGATCGCT TACGCGGCGG CGCGCCGTTC ATCCAGCCCT GGCCGCGGCA GGAACGGGTA TTGTCCCGCG CGGAGCGGCT CGAACTGCAG CAGCTTTTGG TGCAGCGCGG CTATTACCGC GGCGAGCCGG ACGGCCAGAT CGGCGGCCAG ACCCGCGAAG CGCTGCGCAG CTTCCAGGCC TCGGTCGGCG CGCCGGCGGA CGGGTTTGCG TCCAGCGACG TGTTGGAAAG GTTGAGGGGG AGGTAG
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Protein sequence | MRAMSIGTTA RLTAIAATLC GTLGANPASA QSSGPFSLFD NIFTGSISQG SHTAPVWSGE DGASGHPLMT AAAIREAASN FDNCVASLWP DAARRGISQD SFQRFTAGLE PDLRIMDLMD SQPEFTKAIW DYLDILVNDN RLAKGREVLA KYKPQFDAAE RAYGVDRYII AAIWGIESNY STQMGDRSVL QSTATLACVG RRQKYFRDEF LVTLEILHRG DLRPEQMRGS WAGAFGPTQF MPTAFKRFAV DADGDGRRDV VDNPADLIFS TANNLKKDGW QSGATWGYEV VLPQNFNFML ADRGKAVSIA QWQQLGLKRA NNQPFPNPAD KAYVLAPAGA DGPGFLMLQN FRVIMKYNPA EAYALAIGHF ADRLRGGAPF IQPWPRQERV LSRAERLELQ QLLVQRGYYR GEPDGQIGGQ TREALRSFQA SVGAPADGFA SSDVLERLRG R
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