Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0772 |
Symbol | |
ID | 3969939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 857202 |
End bp | 858116 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923887 |
Product | phage integrase |
Protein accession | YP_530662 |
Protein GI | 90422292 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.672054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTGC GAAGATTGAC GGCTTCGTTT CTCGACACCT GCGCGGTCGA ACGCCAGCTG TCGGCGAACA CGCTGCAGGC CTACGGCTAC GACCTCGCGG ATTTCTGTGC ATGGCTCAAA GGCCAAGGCG AGGCGCCGGC GGTCACGACC GAGCACCTGC GCGACTATCT GGAATCCATG ATGGTCGCGC GAAAGCTGTC GCCCTCCACG GTGCGACGGC GGATCGCCTG TCTTCGCGCG TTCTTTCGCT TTCTCGACGA CCGCGGCGAG ATGCCGGACC CGTTCACCGG CTGGCGCCTG AAGCTGCCGC GCCGCAAGCG GTTGCCGCGC GCGCTGTCGC GCGAGGAGGC CAATCAGCTT CTGACCTCGG CGCGCGCGCC CGGCGCCGCG CGACAATCGC TGCCGGCGTC GACGCCGCTC TGCGTCGAGA TCCGGCTGAT GATCTCGACC GGCATCCGGG TCGGCGAGCT GTGCAAGATC GCGACCGGTG ACGTCTCCAG CGACGGCGCG TCGCTGCGAA TTCACGGCAA GGGCTCGCGC GACCGCGTGG TCTACGTCAG CAACCCCGCG CTGCGCAACG AACTGCGCAA GCTGACGACG CTGCGCCAGC GCCTCAGCGC GGGCGACGGC CCGCTGTTCG TCAACCGCAA CGGCGAGAAC CTGCGGCCCT ACTCGTTCCG CACCAAGCTG CGCAACTTCG CCGGCCAGGC CGGACTGCGG CGGCGGGTGA CGCCGCATAT GCTGCGGCAC ACCGCTGCCA CGCTGTTGAT CGAAAGCGGC GTCGACATCA GGATCGTGCA ACGCCTGCTC GGCCATTCCA GCATTGCCAC TACCGAGATC TACACCCACG TCTCCGATGA GGCGCTGCGT AAGAGCCTAG AGCGTGCCAA CGTGCTGGGT ATGCTCGCCG CCTGA
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Protein sequence | MELRRLTASF LDTCAVERQL SANTLQAYGY DLADFCAWLK GQGEAPAVTT EHLRDYLESM MVARKLSPST VRRRIACLRA FFRFLDDRGE MPDPFTGWRL KLPRRKRLPR ALSREEANQL LTSARAPGAA RQSLPASTPL CVEIRLMIST GIRVGELCKI ATGDVSSDGA SLRIHGKGSR DRVVYVSNPA LRNELRKLTT LRQRLSAGDG PLFVNRNGEN LRPYSFRTKL RNFAGQAGLR RRVTPHMLRH TAATLLIESG VDIRIVQRLL GHSSIATTEI YTHVSDEALR KSLERANVLG MLAA
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