| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0766 |
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| Symbol | |
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| ID | 3969933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 848449 |
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| End bp | 849954 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923881 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_530656 |
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| Protein GI | 90422286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGT CCACCGCATT GAGATGGCGA CGTCGCGCCT TTCGCTGGCA ATTGTCAGCG
AAATTGCTGG TCATTTCGCT GGTGGTGACG GTGCTGGCGT TCTCCGCGGT GTGCGGCAGC
GTGCTGCTCG ATATGCGCCG CAACACCGAG GAACTGGCGC GGCAGACGAT GGAAAACCTG
TCGGCCACCA TCGACGCCGA TGTCAGCCGC AATGTCGAGT TCTACGACAA GTCGCTGCAA
GCTGTTGTCA AAAATCTGGC GCTGCCGGAG CTCGCCGACG TCAGCAAGCC GATTCTGCAA
CTGATCCTGT TCGACCGCGC CACCACCGCC CCGCATTTCG GCGCGATCCA GGTGTTCGAC
GCCGCCGGCA ATCTCAGCCT CGACGCCTCG ACCCTGAAGC CGCCGCCCGA GCGCCGCGAC
GACGAAGAGT TCTTCAAGGT CCATCGCGAC AATCCCGACG TCGGCCTCTT CATCAGCCGG
CCGATGCTGT ACCAGGGCGG CTATTCGATC GTGCTCAGTC GCCGCCTCGC GACTCCGAGC
GGCGGATTCA ACGGCATCGT CGTCGGCACC ATCCGGCTCG GCTATTTTCA CGACCTGTTC
CGGCGACTGC GCATCGGCGA GCAGGACGTG GTTTCCATCC TCACCCACAA CGGCGTCATT
ATAATGCGCC GGCCGTTCGA CCTCGACGTG GTCGGCAAGG ACGTCAGCAA TATCGCCGGC
GTGATCAAGA CGCTGGGACA ACGCAGCGGT TGGTTCTCCG GCGTCGGCCT CGATGACGGC
ACGCCGCGGA TGTATGTCTG GAGCGACTCC AGCCATCCGC TGGTGGTGCT GGTCGGCAAG
CCGTGGCGGA ATGTTCTCAG CCTGTGGCGC AAGGAAGCGA TCCGGCTCGG CGCCATCCTG
CTGGTGCTGG CGAGCTTCGT CGCCGGCGTG ACGATCTTCC TGATCCGCGA AATCGACCGC
CGGGCCCGCG CCGAACAGCG GCTGGAGGAA CTGTCGGTCA CCGATCCGCT GACCGGGCTG
ACCAACCGGC GCAAATTCGA TGCCGCGATC GAGACCGAAT GGCAACGCGC GCAACGCCAG
CAGACCCCGG TGGCGCTGTT GATGATCGAT GCCGACCATT TCAAGGGCTA CAATGACAGT
TTCGGCCATC AGGCCGGCGA CCAGATGCTG ATCGGGATCG CGGTCTGCAT CGCGGATTCG
GTGCATCGGG CGGGCGACTG TGCGGCGCGG TTCGGCGGCG AGGAATTCGC CGTGCTGCTG
CCGGGGCTGT CGGCCTACGC GGCGCTGTCG GTTGCCGAAA CCATCCGCGG CAAGGTCGAG
CAGTGGTCGA TCGACCAGAC CGGGGTCACC ATCAGCGTCG GCACCGCGAG CATCACGCCC
GGCCCCGCGA CGCCGTGGTC GGTGCTGGTG GAGGCCGCCG ACAAGGCGCT GTATGCCGCC
AAGGCCAGCG GCCGCAACCG CTCGGTGGTC GCCTCGTCGA CCCGGGAATT GTCGCTGGTG
GCGTGA
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| Protein sequence | MELSTALRWR RRAFRWQLSA KLLVISLVVT VLAFSAVCGS VLLDMRRNTE ELARQTMENL
SATIDADVSR NVEFYDKSLQ AVVKNLALPE LADVSKPILQ LILFDRATTA PHFGAIQVFD
AAGNLSLDAS TLKPPPERRD DEEFFKVHRD NPDVGLFISR PMLYQGGYSI VLSRRLATPS
GGFNGIVVGT IRLGYFHDLF RRLRIGEQDV VSILTHNGVI IMRRPFDLDV VGKDVSNIAG
VIKTLGQRSG WFSGVGLDDG TPRMYVWSDS SHPLVVLVGK PWRNVLSLWR KEAIRLGAIL
LVLASFVAGV TIFLIREIDR RARAEQRLEE LSVTDPLTGL TNRRKFDAAI ETEWQRAQRQ
QTPVALLMID ADHFKGYNDS FGHQAGDQML IGIAVCIADS VHRAGDCAAR FGGEEFAVLL
PGLSAYAALS VAETIRGKVE QWSIDQTGVT ISVGTASITP GPATPWSVLV EAADKALYAA
KASGRNRSVV ASSTRELSLV A
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