Gene RPC_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0725 
Symbol 
ID3970547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp792827 
End bp793783 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID637923840 
Productputative transposase 
Protein accessionYP_530615 
Protein GI90422245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.420818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGC ACTTCCTTCT CTCGGCAAAA GCCCGCACTC TCTCGCTCAA GTCGATCTTC 
GCGGCTGGCG AGGAAAAGGC TTACGAGACG TTCTGCAAGC TCCGCTGGCC TGCCACGGAC
GGCGAGCCCG TTTGCCCGTT CTGCGGTGGC CTGGACGCCT ACAGGATCAC CACGCGTCGT
CGCTTCAAAT GTAAGGCTTG CCTGCGCCAG TTCTCGGTTA CGAGCGGGAC TATTCTCGCG
TCGCGCAAGA TGTCGTTCAC CGACCTCTTG GCCGCGATCT GCATCATCGT GAATGGCGCC
AAGGGTATCT CTGCCCTGCA GCTCGCGCGC GACATCAACT GCCAGCACAA GACGGCTTTC
GTGCTTTCGC ACAAGCTGCG CGAGGCTATG GCGTCGGAAG CAGCTAAGAC GTTGGGTGGC
GAAGTTGAGG TTGATGGGGC CTACTTTGGC GGCCACATTC GGCCCGCCAA CTACGCCGAA
AACAGGATCG ATCGGCGGTT AGCCGAGCAC CAGACCGGCA AGCGCCGCGT CGTCATCGTT
CTTCGCGAAC GCAACGGCAG TACGGTTACA TTCGTCCGCA AGAGTGAAGC GGAAGGCGTC
GATATCGCCA AGCGTATCGT TTCCCGCGAC GCTATCATGC ACGCTGACGA AGCGGCGCAT
TGGGACGCGC TGCGCGCCGG TTGGCAGGTT CACAGGATTA ATCACTCGGA GGCTTACTGC
GATGACGGCG CGTGCACGAA CCAAGCTGAA AGCTATTTCT CACGCCTTCG CCGCATGGTT
GACGGGCAAC ACCATTCCGT CTCGCCGCAA TACCTGCACC AGTACGCAGG CCATGCCGCT
TGGATTGAGG ACAACCGCCG TCTCGACAAC GGCGCGCTGG CAAGCCGCAT CGGCGGGTTG
GCGATGGCTC ATCCGGTTAG CCGGAATTGG AAGGGATATT GGCAGCGGGC GGCTTAA
 
Protein sequence
MAQHFLLSAK ARTLSLKSIF AAGEEKAYET FCKLRWPATD GEPVCPFCGG LDAYRITTRR 
RFKCKACLRQ FSVTSGTILA SRKMSFTDLL AAICIIVNGA KGISALQLAR DINCQHKTAF
VLSHKLREAM ASEAAKTLGG EVEVDGAYFG GHIRPANYAE NRIDRRLAEH QTGKRRVVIV
LRERNGSTVT FVRKSEAEGV DIAKRIVSRD AIMHADEAAH WDALRAGWQV HRINHSEAYC
DDGACTNQAE SYFSRLRRMV DGQHHSVSPQ YLHQYAGHAA WIEDNRRLDN GALASRIGGL
AMAHPVSRNW KGYWQRAA