| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0703 |
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| Symbol | |
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| ID | 3970564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 766832 |
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| End bp | 769666 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923819 |
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| Product | putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase |
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| Protein accession | YP_530594 |
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| Protein GI | 90422224 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA TCACCGGCGC GGTCCCCAAC GAGCTGCTGC GCTACGAACA GGCGCGCAGC
ACGCTCGAAA CCACCCGCAG CGAGCTCGAA GAGCTGCAGC ATAGCGAAGC GGTCAGCGTG
TTTCAGAAGC AGATCGCGCT GTTGCAGAAG CGGCTCTTGA ACGATCCGGC GTCGCTGCGC
GACATGTTCA TCAATGACGG CACCCAGGCG ATCGTCTGGG AATTCCAGCA GCCGGCGCTG
GGGCTCGGTT TCACCGTGAC GATGTGGGAC TTGTTGAAGC GCGGCGACGA CATGAGCACG
ATCCTGCAGC GCTTCATCTG GGCGCTGCCG TTGAAGTTCA AGCGCAAGTT CATCAAGGCG
ATCGATAGCC ATCTGTCGGA CAGCTACCCG ATGTTCCGCG GGCTGTCGGA AGGCTGGCCC
GGCGAGAACT TCATTCCGCC CTATATCCGC CCGGCGGAAG AGCGGATGTT CGACTTCGAT
CTCGTGAACC AGGGCTATCT CGGCTACACC AGCCTCGGCT ACAGCGTCCG CGAGGTCGAA
CTGTTCGTCT GGCTGGAAGT GCTGCGCGAC AAGCAGTGCG ACGACAAGCC CTGCGAAATC
GGCCTATTGA TCGCCGGCAA GAGCGAGCCG AAGGGCGGCT GCCCGGTCAA GATTCACATT
CCGGAAATGC TCGACCTGCT CGGCACCGGC CGCCACCGCG AGGCGCTGGA GCTGATCGAA
AGCTGCAACC CGCTGCCCAA CGTGACGGGG CGGGTCTGTC CGCAGGAATT GCAGTGCCAG
GGCGTCTGCA CCCACACCAA GCGGCCGATC GAGATCGGCC AGCTGGAATG GTACCTGCCG
CAGCACGACA AGCTGGTGAA CCCGGACGCC AACCAGCGCT TCGCCGGCAT GCTCAGCCCG
TGGGCGGCGG CGACCAAGCC GCCGATCGCG GTGGTCGGCT CCGGCCCCGC AGGCCTGATC
AACGCTTATC TGCTCGCCGC GGAAGGCTTC CCGGTCACGG TGTTCGAGGC GTTCCACGAC
CTCGGCGGCG TGCTGCGCTA CGGCATTCCC GAGTTCAGAT TGCCGAATTC GCTGATCGAC
GACGTGGTGG AGAAGATCAC GCTGCTCGGC GGCCGCTTCG TGCGCAACTT CGTGGTCGGC
AAGACCGCGA CGCTGGAAGA TCTCAAAGCC GCCGGCTTCT GGAAAGTATT TCTCGGTACC
GGCGCCGGTC TGCCGACCTT CATGAACGTG CCCGGCGAAC ATCTGTTGGG CGTGATGTCG
GCCAACGAGT TCCTGACCCG CGTCAACCTG ATGCGCGGGC TCGACGACAA GTACGAGACC
CCGTTGCCGG AGATCCGCGG CAAAGAGGTG TTCGTGATCG GCGGCGGCAA CACCGCGATG
GACGCGGCCC GCACCGCCAA ACGGCTCGGC GGCAACGTCA CCATCGTGTA TCGCCGCACC
CAGAAGGAAA TGCCGGCGCG CGTCGAGGAA CTGCATCACG CGCTGGAAGA AGGCATCAAC
CTCGCGGTGC TGCGCGGCCC GAGTGAATTC ATCGGCGACG GCAAGACCAA CTTCGTCACC
CACGCGGTGC TCGACGTCAA CGAACTCGGC GCCCCGGACA AGTCCGGCCG CCGCAGCCCG
ACGCCGACCG GCAAGGTCGA ACGGGTGCCG GTCGATCTCG TCATCATGGC GCTCGGCAAC
ACCGCCAACC CGATCATGAA GGACGCCGAG CCCGAGCTGA AGACCAATAA ATGGGGCACC
ATCGAGGTCG AGCGGAACTC GCAGCGCACC TCGATCAAGG ACGTCTATTG CGGCGGCGAC
GCCGCGCGCG GCGGCTCCAC GGCGATCCGT GCGGCCGGCG ACGGCCAGGC CGCGGCGAAG
GAAATCGTCG GCGAGATTCC GTTCTCCTCC GCCGAGATCA CCACCATGGT GGCCAATGCG
GCGCGCTACA CCGAACTCGG CCAGATGAAG CCGACCATCG TCGACAAGAT CGAACTGGCC
GGCGGCATCG TCGAATTCGT GGTGCGCTCG CCGATGGTGG CGAAGGCGGC GCAGGCGGGA
CAATTCGTCC GGGTGCTGCC GTGGGACAAG GGCGAGCTGA TCCCGCTGAC GCTGGCGGAT
TGGGATGTCG AGGCCGGCAC TATCGATCTG GTGGTGCAAG GCATGGGCAC CTCGTCCTTG
GAAATCAACC GGATGGCGAT CGGCGACGCG TTCTCCGGCA TCGCCGGTCC GCTCGGCCGC
GCCTCGGAGC TGCATCGCTA CGAGGGCAAC CAGACGGTAG TGTTCACTGC CGGCGGCGTC
GGTCTGCCGC CGGTCTATCC GATCATGCGG GCGCATCTGA AGCTCGGCAA TCACGTCACG
CTGATCTCCG GCTTCCGCGC CAAGGACTTC CTGTTCTGGA CCGGCGAGCA GGAGCGGGTC
GGCAAATTGC AGGCCGAGTT CGGCGATCAG CTCGAGGTGA CCTACACCAC CAATGACGGC
AGCTTCGGCG TCAAGGGCTT CGTCTCCGGA CCGCTCGAGG AGATGCTGAA GGCCAACCAA
GCAGGCAAGG GCCGCACCAT CGCCGAAGTG ATCGCGATCG GACCGCCGCT GATGATGCGG
GCGATCAGTG ACCTCACCAA GCCTTATGGG GTGAAGACCG TGGCGAGCCT CAACTCGATC
ATGGTCGATG CCACCGGGAT GTGCGGCGCC TGCATGGTGC CGGTGACCAT CGACGGTAAG
ATGGTCCGCA AGCACGCCTG CATCGATGGT CCCGAACTCG ACGCCCACAT CATCGATTGG
GACAAATTCC TGCCGCGCTT CAATCAGTTC AAGGCCCAGG AGCTGGACAG CAAGAAGAAG
CACGGCTTCG CCTGA
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| Protein sequence | MSGITGAVPN ELLRYEQARS TLETTRSELE ELQHSEAVSV FQKQIALLQK RLLNDPASLR
DMFINDGTQA IVWEFQQPAL GLGFTVTMWD LLKRGDDMST ILQRFIWALP LKFKRKFIKA
IDSHLSDSYP MFRGLSEGWP GENFIPPYIR PAEERMFDFD LVNQGYLGYT SLGYSVREVE
LFVWLEVLRD KQCDDKPCEI GLLIAGKSEP KGGCPVKIHI PEMLDLLGTG RHREALELIE
SCNPLPNVTG RVCPQELQCQ GVCTHTKRPI EIGQLEWYLP QHDKLVNPDA NQRFAGMLSP
WAAATKPPIA VVGSGPAGLI NAYLLAAEGF PVTVFEAFHD LGGVLRYGIP EFRLPNSLID
DVVEKITLLG GRFVRNFVVG KTATLEDLKA AGFWKVFLGT GAGLPTFMNV PGEHLLGVMS
ANEFLTRVNL MRGLDDKYET PLPEIRGKEV FVIGGGNTAM DAARTAKRLG GNVTIVYRRT
QKEMPARVEE LHHALEEGIN LAVLRGPSEF IGDGKTNFVT HAVLDVNELG APDKSGRRSP
TPTGKVERVP VDLVIMALGN TANPIMKDAE PELKTNKWGT IEVERNSQRT SIKDVYCGGD
AARGGSTAIR AAGDGQAAAK EIVGEIPFSS AEITTMVANA ARYTELGQMK PTIVDKIELA
GGIVEFVVRS PMVAKAAQAG QFVRVLPWDK GELIPLTLAD WDVEAGTIDL VVQGMGTSSL
EINRMAIGDA FSGIAGPLGR ASELHRYEGN QTVVFTAGGV GLPPVYPIMR AHLKLGNHVT
LISGFRAKDF LFWTGEQERV GKLQAEFGDQ LEVTYTTNDG SFGVKGFVSG PLEEMLKANQ
AGKGRTIAEV IAIGPPLMMR AISDLTKPYG VKTVASLNSI MVDATGMCGA CMVPVTIDGK
MVRKHACIDG PELDAHIIDW DKFLPRFNQF KAQELDSKKK HGFA
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