| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0680 |
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| Symbol | |
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| ID | 3970619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 742293 |
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| End bp | 743492 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923796 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_530571 |
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| Protein GI | 90422201 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAT CAGTGCGTTT GACGCCTTTG CATTCCACGC GCCGACACAT CACCCGGCTG
CTCGCAGCGG TCGCCGTCTC CGGCTTTGCC ATCGTCCCTT CGGCTTTCGC GCAGGCAACC
GTCAAGGTCG GCTCGGTGCT GTCGGTGACC GGACCGGCGT CGTTCCTCGG CGACCCCGAG
GACAAGACGC TGAAGCTCTA TGTCGACAAG ATCAACGCCG CCGGCGGCGT CGCCGGCAAG
AAGATCGAGC TGGTGGTCTA TGACGACGGC GGCGACGCCA ACAAGGCGCG CACCTTTGCG
ACACGGCTGA TCGAGGACGA CAAGGTGGTG GCGATGGTCG GCGGCTCCAC CACCGGCACC
ACCATGGCGA TGATCCCGGT GTTCGAAGAG GCGCAGATCC CGTTCATCTC GCTGGCCGGC
GCCATCGAAA TCATCGAGCC GGTGCGCAAA TACGTGTTCA AGACGCCGCA CACCGACAAG
ATGGCCTGCG AGAAGATCTT TGAAAACATC AAGCAGCGCG GCTTCACCAA GGCGGCGCTG
ATCTCCGGCA CCGACGGCTT CGGCTCCTCG ATGCGCGCGC AATGCGTCAA GGTGGCGCCA
ACCTATGGCG TGCAGATCGT CACCGAGGAA ACCTACGGCC CGCGCGACAG CGACATGACC
GCCCAGCTCA CCAAGATCAA GGGCACCGCC GGCATCCAGG CGGTGGTCAA TCCGGGCTTC
GGCCAGGGCC CGGCGATCGT CACCCGCAAC TACGCGCAGC TCGGCCTATC GTCGACGCCG
CTGTACCAGA GCCATGGTGT CGCCTCGAAG AGCTTCATCG ACCTCGCCGG TCCTGCGGCC
GAAGGCGTGC GGCTGCCCGC CGCGGCGCTG TTGGTCGGCG ACAAGCTGCC GGACGGCGAT
CCGCAGAAGA AGGTCGTGGT CGACTACAAG AAGACCTATG AGGACAGCAC CAAACAGCCG
GTCTCGACCT TCGGCGGCCA CGGCTATGAC GGGCTGTTCA TTTTGGTCGA GGCGATGAAG
CGGGCGAATT CCACCGACCC GAAGAAGATC CGCGACGAGA TCGAGAAGAC CAAAGGCTTC
GTCGGCACCG GCGGCATCGT CACCATGTCG CCAACCGATC ACCTCGGCCT CGACCTCTCC
GCGTTCCGCA TGTTGGAGGT GAAGAGCGGC GACTGGACGC TGCTGCCGTC GGGGAGCTGA
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| Protein sequence | MTQSVRLTPL HSTRRHITRL LAAVAVSGFA IVPSAFAQAT VKVGSVLSVT GPASFLGDPE
DKTLKLYVDK INAAGGVAGK KIELVVYDDG GDANKARTFA TRLIEDDKVV AMVGGSTTGT
TMAMIPVFEE AQIPFISLAG AIEIIEPVRK YVFKTPHTDK MACEKIFENI KQRGFTKAAL
ISGTDGFGSS MRAQCVKVAP TYGVQIVTEE TYGPRDSDMT AQLTKIKGTA GIQAVVNPGF
GQGPAIVTRN YAQLGLSSTP LYQSHGVASK SFIDLAGPAA EGVRLPAAAL LVGDKLPDGD
PQKKVVVDYK KTYEDSTKQP VSTFGGHGYD GLFILVEAMK RANSTDPKKI RDEIEKTKGF
VGTGGIVTMS PTDHLGLDLS AFRMLEVKSG DWTLLPSGS
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