Gene RPC_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0676 
Symbol 
ID3970615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp738751 
End bp739455 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content67% 
IMG OID637923792 
ProductABC transporter related 
Protein accessionYP_530567 
Protein GI90422197 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.607821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGAGG TCGCAGCCCT ACACTCCGGC TACGGCCGCA TCGCGGTGCT GCACGGCATC 
GACATCAGCG TGCGCGCCGG CGAAGTGGTG GCGCTGATCG GCTCCAACGG CGCCGGCAAG
ACCACGCTGC TGCGCGCATT GAGCGGGGTG CAGCCGGTGT CCGGCGGCGA GATCCGGTTT
CTCGGCGAGC GCATCGACAG ATTGCCACCG CACCAGCGCG TTGCCCGCGG CATTCTGCAA
TCGCCGGAAG GCCGCCAGGT GTTCGGCCCG CTCAGCGTGC AGGACAATCT GCGGCTCGGC
GGCTATCTGC GCCGCGACGC CGAGATCGAG TACGACCGCG AGCGGATCTT TACGATGTTT
CCCGTGCTGA AGGACAAGCG GCACCACGCC GCCGGCGGAC TATCCGGCGG TCAACAGCAG
ATGCTGGCGA TCGGCCGCGC GCTGATGGGC AAGCCGAAAC TGTTGCTGCT CGACGAGCCG
TCGCTCGGGC TGTCGCCGCT ATTGGTCGAT CAGATCCTCG CAGCGGTGGT GGCGCTGCGC
CGCGACGGCA TCACCGTGCT ATTGGTCGAG CAGAATGCCG CGGCCGCGCT GGACATCGCC
GACCGCGGCT ATGTGATCGA GACCGGACGG ATCGTGCATA GCGGGCCGGC CGCGGATCTG
CTGTCGGACC CCAAAGTGAA ATCGGCCTAT CTGGGGTTCG ACTGA
 
Protein sequence
MLEVAALHSG YGRIAVLHGI DISVRAGEVV ALIGSNGAGK TTLLRALSGV QPVSGGEIRF 
LGERIDRLPP HQRVARGILQ SPEGRQVFGP LSVQDNLRLG GYLRRDAEIE YDRERIFTMF
PVLKDKRHHA AGGLSGGQQQ MLAIGRALMG KPKLLLLDEP SLGLSPLLVD QILAAVVALR
RDGITVLLVE QNAAAALDIA DRGYVIETGR IVHSGPAADL LSDPKVKSAY LGFD