Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0676 |
Symbol | |
ID | 3970615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 738751 |
End bp | 739455 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923792 |
Product | ABC transporter related |
Protein accession | YP_530567 |
Protein GI | 90422197 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.607821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTGAGG TCGCAGCCCT ACACTCCGGC TACGGCCGCA TCGCGGTGCT GCACGGCATC GACATCAGCG TGCGCGCCGG CGAAGTGGTG GCGCTGATCG GCTCCAACGG CGCCGGCAAG ACCACGCTGC TGCGCGCATT GAGCGGGGTG CAGCCGGTGT CCGGCGGCGA GATCCGGTTT CTCGGCGAGC GCATCGACAG ATTGCCACCG CACCAGCGCG TTGCCCGCGG CATTCTGCAA TCGCCGGAAG GCCGCCAGGT GTTCGGCCCG CTCAGCGTGC AGGACAATCT GCGGCTCGGC GGCTATCTGC GCCGCGACGC CGAGATCGAG TACGACCGCG AGCGGATCTT TACGATGTTT CCCGTGCTGA AGGACAAGCG GCACCACGCC GCCGGCGGAC TATCCGGCGG TCAACAGCAG ATGCTGGCGA TCGGCCGCGC GCTGATGGGC AAGCCGAAAC TGTTGCTGCT CGACGAGCCG TCGCTCGGGC TGTCGCCGCT ATTGGTCGAT CAGATCCTCG CAGCGGTGGT GGCGCTGCGC CGCGACGGCA TCACCGTGCT ATTGGTCGAG CAGAATGCCG CGGCCGCGCT GGACATCGCC GACCGCGGCT ATGTGATCGA GACCGGACGG ATCGTGCATA GCGGGCCGGC CGCGGATCTG CTGTCGGACC CCAAAGTGAA ATCGGCCTAT CTGGGGTTCG ACTGA
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Protein sequence | MLEVAALHSG YGRIAVLHGI DISVRAGEVV ALIGSNGAGK TTLLRALSGV QPVSGGEIRF LGERIDRLPP HQRVARGILQ SPEGRQVFGP LSVQDNLRLG GYLRRDAEIE YDRERIFTMF PVLKDKRHHA AGGLSGGQQQ MLAIGRALMG KPKLLLLDEP SLGLSPLLVD QILAAVVALR RDGITVLLVE QNAAAALDIA DRGYVIETGR IVHSGPAADL LSDPKVKSAY LGFD
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