| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0579 |
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| Symbol | |
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| ID | 3970745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 630587 |
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| End bp | 631909 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637923696 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_530473 |
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| Protein GI | 90422103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0872803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTGG ACGTGAAACT CAACGAAATC TACGAAATGC TGCTGGCCGC GACCCGTTCG
GTCGGTGCGG AGATTACGTC GCCCTGGTTC TATTTCCAAC TCGGCCTGAT CATCGCCGGG
GCCGGCATCG CTTATGCCAT CGGGGCGACG GTGCGCGCCC GGGTCGATCT GAGCACGACC
TCGACGGGCT GGCCGGCGCC GCTGCGGCTG CTGCGTCGGG TGATGGTCGG CAGCGCCTCG
ACCGCGGCCT TCGCGGTGGT GATGATGGCG GCGCGCGGCG GCATGCTGGC TTGGACCTGG
CCGAGCCGCA GCTATCTCTT GGCGGTCTGC GCCAAGCTGG CGCTGGCCTG GCTGGTGATC
CGGCTGGTGA CCAGCGTGAT CCGCAACGGA TTCCTGGTCC GGCTGGTCTC GCTGTCGGCG
TGGTGCGTCG CCGCGCTGAG CATTCTGGGC CAGCTCGAAC AGACCATCGA GGCGCTGGAC
TCGGTGTCGG TGGTGGTCGG CGGATTGCGG TTGACGCCGC TGTTGCTGAT CAAGCTGGTG
GTGCTGCTGG CGATCGCGCT GTGGCTGACC AACGTCGCCA GCAAGTTCCT GGAGGGCCGC
ATCGCGCAGT CGCGCGACCT CACCCCGTCG ATCCAGGTGC TCTTGATCAA GCTGGTGCGG
GTCGCGCTGA TGATCTTCGC CGTCACCGTG GTGATGAGCG CGGTCGGCAT CAACCTGTCG
GCGCTGGCGA TCTTCTCCGG CGCCGCCGGC GTCGGTATCG GCTTCGGTCT GCAGAAGATC
GTCGCCAATT TCATCAGCGG GGTGATCCTG CTGGCCGACA AGTCGGTGAA GCCCGGCGAC
CTCGTCACCA TCGGCGACAG TTTCGGCCGG ATCAGCGCCA TGAACACCCG CTATATCTCG
GTCTCGGCCG GCGACGGCCG CGAGTTCCTG ATCCCCAACG AGGATCTGGT CACGCAAAAG
GTGGTGAACT GGACCTACAC CGACAAGAAC ACCATGGTGA AGGTCAATTT CGGCACCAAT
TACGACGCCG ACCCGCGGCT GGTGTGCAAA CTGGCCGCCG ACGTCGCCGC GGCGGTGCCG
CGCGCCATCA AGCACAAGAC CCCGAGCTGC CTTTTGACGG AATTCACCGA GGCGGGAATG
AAATTCTCCC TGACCTTCTG GATTGCCGAT CCCGACGGCA TGGACCGGGT GCGCAGCGAC
GTCATGCTGA CCTTGTGGGA GGCCTTCAAG CGCGAGGGCA TCCGGGTGCC CTATCCGGTG
CGGGAGATCC GCATCCGCGG CGGCGCCTTG CCGGTGGAAA CCGTGGTCGA AGTGGCGCCG
TGA
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| Protein sequence | MELDVKLNEI YEMLLAATRS VGAEITSPWF YFQLGLIIAG AGIAYAIGAT VRARVDLSTT
STGWPAPLRL LRRVMVGSAS TAAFAVVMMA ARGGMLAWTW PSRSYLLAVC AKLALAWLVI
RLVTSVIRNG FLVRLVSLSA WCVAALSILG QLEQTIEALD SVSVVVGGLR LTPLLLIKLV
VLLAIALWLT NVASKFLEGR IAQSRDLTPS IQVLLIKLVR VALMIFAVTV VMSAVGINLS
ALAIFSGAAG VGIGFGLQKI VANFISGVIL LADKSVKPGD LVTIGDSFGR ISAMNTRYIS
VSAGDGREFL IPNEDLVTQK VVNWTYTDKN TMVKVNFGTN YDADPRLVCK LAADVAAAVP
RAIKHKTPSC LLTEFTEAGM KFSLTFWIAD PDGMDRVRSD VMLTLWEAFK REGIRVPYPV
REIRIRGGAL PVETVVEVAP
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